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Taxonomy browser (Salmonella enterica subsp. enterica serovar Typhimurium)

Salmonella enterica subsp. enterica serovar Typhimurium

Taxonomy ID: 90371 (for references in articles please use NCBI:txid90371)
current name
Salmonella enterica subsp. enterica serovar Typhimurium
homotypic synonym:
Salmonella enterica serotype Typhimurium
Salmonella enterica serovar Typhimurium
Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:1,2
NCBI BLAST name: enterobacteria
Rank: no rank
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
heterotypic synonym
Salmonella choleraesuis serotype typhimurium
heterotypic synonym
Salmonella enterica ser. typhimurium
heterotypic synonym
"Bacillus typhimurium" Loeffler 1892, effective name 1)
heterotypic synonym
"Salmonella typhi-murium" (sic) (Loeffler 1892) Castellani and Chalmers 1919, effective name 1)
heterotypic synonym
Salmonella typhimurium (Loeffler 1892) Castellani and Chalmers 1919
type strain of Salmonella typhimurium: NCTC:74, JCM:1652, CIP:58.58, ATCC:13311
heterotypic synonym
Salmonella enterica 1,4,[5],12,:i:1,2
Lineage( full )
cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica; Salmonella enterica subsp. enterica
   Entrez records   
Database name Subtree links Direct links Links from type
Nucleotide 454,179 294,597 1,122
Protein 6,237,394 3,725,105 -
Structure 1,078 564 -
Genome 1 1 -
Popset 147 147 -
Conserved Domains 11 5 -
GEO Datasets 4,277 2,397 -
PubMed Central 24,343 24,342 -
Gene 52,248 2,872 -
SRA Experiments 31,388 27,516 -
Identical Protein Groups 735,055 681,623 -
Bio Project 852 540 -
Bio Sample 35,267 31,756 271
Bio Systems 4,042 304 -
Assembly 23,948 22,670 6
Probe 514 312 -
PubChem BioAssay 4,351 4,285 -
Taxonomy 165 1 -

Notes:

Comments and References:

Castellani A & Chalmers AJ (1919)
Castellani, A., and Chalmers, A.J. Manual of Tropical Medicine, 3rd ed. (1919). Williams Wood and Co., New York. [No PubMed abstract available.]
Chang HR et al. (1997)
Chang, H.R., Loo, L.H., Jeyaseelan, K., Earnest, L., and Stackebrandt, E. "Phylogenetic relationships of Salmonella typhi and Salmonella typhimurium based on 16S rRNA sequence analysis." Int. J. Syst. Bacteriol. (1997) 47:1253-1254.
Ezaki T et al. (2000)
Ezaki, T., Kawamura, Y., and Yabuuchi, E. "Recognition of nomenclatural standing of Salmonella typhi (Approved Lists 1980), Salmonella enteritidis (Approved Lists 1980) and Salmonella typhimurium (Approved Lists 1980), and conservation of the specific epithets enteritidis and typhimurium. Request for an opinion." Int. J. Syst. Evol. Microbiol. (2000) 50:945-947.
Lapage SP et al. (1992) (reference with type strain information)
Lapage, S.P., Sneath, P.H.A., Lessel, E.F., Skerman, V.B.D., Seeliger, H.P.R., and Clark, W.A. "International Code of Nomenclature of Bacteria (1990 revision)." American Society for Microbiology, Washington, D.C. (1992). [No PubMed record available.]
Loeffler F (1892)
Loeffler, F.: Zent. Bakteriol. Parasitenk. Infektionsk. Hyg. Abt. I. (1892) 11:129-141.
Skerman VBD et al. (1980) (Salmonella typhimurium)
Skerman, V.B.D., McGowan, V., and Sneath, P.H.A. (editors). "Approved lists of bacterial names." Int. J. Syst. Bacteriol. (1980) 30:225-420. [No PubMed record available.]
Tindall BJ et al. (2005)
Tindall, B.J., Grimont, P.A.D., Garrity, G.M., and Euzeby, J.P. "Nomenclature and taxonomy of the genus Salmonella." Int. J. Syst. Evol. Microbiol. (2005) 55:521-524.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
23 records from this provider organism-specific BioCyc
64 records from this provider organism-specific Genomes On Line Database
Salmonella enterica subsp. enterica serovar typhimurium culture/stock collections Global Catalogue of Microorganisms
Related Immune Epitope Information gene/protein/disease-specific Immune Epitope Database and Analysis Resource
100 records from provider organism-specific Integrated Microbial Genomes
Notes:
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Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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