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Taxonomy browser (Gallus gallus)

Gallus gallus

Taxonomy ID: 9031 (for references in articles please use NCBI:txid9031)
Scientific name: Gallus gallus
Genbank common name: chicken
Inherited blast name: birds
Rank: species
Genetic code: Translation table 1 (Standard)
Mitochondrial genetic code: Translation table 2 (Vertebrate Mitochondrial)
Other names:
synonym: Gallus gallus domesticus
common name: bantam
common name: chickens
includes: dwarf Leghorn chickens
includes: red junglefowl
Lineage( abbreviated )
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
   Entrez records   
Database name Subtree links Direct links
Nucleotide 373,281 372,886
Nucleotide EST 600,435 600,435
Nucleotide GSS 164,631 164,631
Protein 75,187 74,885
Structure 1,559 1,559
Genome 1 1
Popset 393 387
GEO Datasets 10,583 10,583
UniGene 33,850 33,850
PubMed Central 7,913 7,913
Gene 49,746 49,707
HomoloGene 13,352 13,352
SRA Experiments 7,616 7,498
GEO Profiles 245,610 245,610
Protein Clusters 13 13
Bio Project 886 865
Bio Sample 12,522 12,339
Bio Systems 322 322
Assembly 7 7
Clone DB 446,493 446,493
Probe 51,850 51,850
PubChem BioAssay 1,046 1,046
Taxonomy 6 1

Genome Information

See the NCBI Genome homepage
Go to NCBI genomic BLAST page for Gallus gallus
Genome view: 33 chromosomes
Names 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 32 W Z LGE64 LGE22C19W28_E50C23
   Trace records (raw single-pass reads of DNA sequence)   
Sequencing Center Name
Record counts per type
CLONEEND FINISHING PCR PRIMERWALK SHOTGUN WGS ALL
BGI - Beijing Genome Institute
- - - - 2,691,942 - 2,691,942
NISC - NIH Intramural Sequencing Center
- - - - 306,700 - 306,700
UOKNOR - University of Oklahoma Norman Campus, Advanced Center for Genome Technology
- 11 - - 1,999 - 2,010
WUGSC - Washington University, Genome Sequencing Center
648,839 69,598 9,640 134,033 3,694,811 10,784,335 15,341,256
Totals per type
648,839 69,609 9,640 134,033 6,695,452 10,784,335 18,341,908

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Gallus gallus taxonomy/phylogenetic Animal Diversity Web
2 records from this provider taxonomy/phylogenetic AnimalBase
3 records from this provider taxonomy/phylogenetic Arctos Specimen Database
DNA barcoding : Gallus gallus taxonomy/phylogenetic Barcodes of Life
2 records from this provider supplemental materials Dryad Digital Repository
Gallus gallus (Linnaeus, 1758) taxonomy/phylogenetic Encyclopedia of life
4 records from this provider organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Related Immune Epitope Information gene/protein/disease-specific Immune Epitope Database and Analysis Resource
Gallus gallus (Linnaeus, 1758) taxonomy/phylogenetic Integrated Taxonomic Information System
Gallus gallus taxonomy/phylogenetic Lifemap
chicken (genome proposal) taxonomy/phylogenetic NHGRI genome proposal white papers
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Gallus gallus taxonomy/phylogenetic TreeBase
UCSCgb sequence screening/similarity/alignment UCSC Genome Browser
WebScipio: Gallus gallus organism-specific WebScipio - eukaryotic gene identification
2 records from this provider organism-specific diArk - a resource for eukaryotic genome research
Wikipedia taxonomy/phylogenetic iPhylo
Breeds of Livestock (Oklahoma State) taxdemo
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.


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