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Taxonomy browser (Alkalihalobacillus halodurans)

Alkalihalobacillus halodurans

Taxonomy ID: 86665 (for references in articles please use NCBI:txid86665)
current name
Alkalihalobacillus halodurans (Nielsen et al. 1995) Patel and Gupta 2020 in [Patel S & Gupta RS (2020)]
basionym:
Bacillus halodurans (ex Boyer 1973) Nielsen et al. 1995
type strain of Bacillus halodurans: ATCC:27557, CIP:105296, DSM:497, BCCM/LMG:7121, NRRL:B-3881, personal::PN-80
homotypic synonym:
"Bacillus alcalophilus subsp. halodurans" Boyer et al. 1973, effective name 1)
includes:
Bacillus sp. (STRAIN C-125)
Bacillus sp. (strain AH-101)
Bacillus sp. AH-101
Bacillus sp. C-125
Bacillus sp. MIR32
Bacillus sp. SDe12
NCBI BLAST name: firmicutes
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
heterotypic synonym
Alkalihalobacillus okuhidensis (Li et al. 2002) Patel and Gupta 2020 in [Patel S & Gupta RS (2020)]
basionym:
Bacillus okuhidensis Li et al. 2002
type strain of Bacillus okuhidensis: DSM:13666, JCM:10945, personal::GTC 854
includes:
Bacillus sp. GTC854
Bacillus sp. GTC855
equivalent:
Bacillus okuhidaensis
Lineage( full )
cellular organisms; Bacteria; Terrabacteria group; Firmicutes; Bacilli; Bacillales; Bacillaceae; Alkalihalobacillus
   Entrez records   
Database name Subtree links Direct links Links from type
Nucleotide 2,071 1,714 386
Protein 23,262 17,810 -
Structure 252 102 -
Genome 1 1 -
Popset 19 19 -
GEO Datasets 16 16 -
PubMed Central 1,528 1,526 -
Gene 4,173 1 -
SRA Experiments 12 12 -
Protein Clusters 1,799 1,799 -
Identical Protein Groups 14,464 13,788 -
Bio Project 9 8 -
Bio Sample 19 18 2
Bio Systems 232 - -
Assembly 6 5 1
Probe 7 7 -
Taxonomy 2 1 -

Notes:

Comments and References:

Patel S & Gupta RS (2020), PubMed: abstract
Patel S, Gupta RS. "A phylogenomic and comparative genomic framework for resolving the polyphyly of the genus Bacillus: Proposal for six new genera of Bacillus species, Peribacillus gen. nov., Cytobacillus gen. nov., Mesobacillus gen. nov., Neobacillus gen. nov., Metabacillus gen. nov. and Alkalihalobacillus gen. nov." Int. J. Syst. Evol. Microbiol. (2020) 70(1):406-438.
Boyer EE et al. (1973)
Boyer, E.E., Ingle, M.B., and Mercer, G.D. "Bacillus alcalophilus subsp. halodurans subsp. nov.: an alkaline amylase producing alkalophilic organism." Int. J. Syst. Bacteriol. (1973) 23:238-242. [No PubMed record available.]
Joshi A et al. (2021), other link:https://www.ncbi.nlm.nih.gov/pmc/PMC8543038
Joshi, A., Thite, S., Karodi, P., Joseph, N., and Lodha, T. "Alkalihalobacterium elongatum gen. nov. sp. nov.: An antibiotic-producing bacterium Iiolated from Lonar Lake and reclassification of the genus Alkalihalobacillus into seven novel genera." Front. Microbiol. (2021) 12:722369.
Martinez MA et al. (2002)
Martinez, M.A., Delgado, O.D., Breccia, J.D., Baigori, M.D., Sineriz, F. "Revision of the taxonomic position of the xylanolytic Bacillus sp. MIR32 reidentified as Bacillus halodurans and plasmid-mediated transformation of B. halodurans." Extremophiles (2002) 6:391-395, DOI: 10.1007/s00792-002-0269-4
Nielsen P et al. (1995)
Nielsen, P., Fritze, D., and Priest, E.G. "Phenetic diversity of alkaliphilic Bacillus strains: proposal for nine new species." Microbiology (1995) 141:1745-1761. [No PubMed record available.]
Takami H et al. (1999b)
Takami, H., Nogi, Y., Horikoshi, K. "Reidentification of the keratinase-producing facultatively alkaliphilic Bacillus sp. AH-101 as Bacillus halodurans." Extremophiles (1999) 3:293-296.
VALIDATION LIST No. 55 (1995)
VALIDATION LIST No. 55. Int. J. Syst. Bacteriol. (1995) 45:879-880.
Li Z et al. (2002)
Li, Z., Kawamura, Y., Shida, O., Yamagata, S., Deguchi, T., and Ezaki, T. "Bacillus okuhidensis sp. nov., isolated from Okuhida spa area of Japan." Int. J. Syst. Evol. Microbiol. (2002) 52:1205-1209.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Alkalihalobacillus halodurans meta-databases BacDive
Bacillus halodurans isolate LB-1 chromosome organism-specific BioCyc
Bacillus halodurans (ex Boyer 1973) Nielsen et al., 1995 taxonomy/phylogenetic Encyclopedia of life
Bacillus halodurans culture/stock collections Global Catalogue of Microorganisms
Bacillus halodurans taxonomy/phylogenetic Lifemap
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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