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Taxonomy browser (Chlamydia abortus)

Chlamydia abortus

Taxonomy ID: 83555 (for references in articles please use NCBI:txid83555)
current name
Chlamydia abortus (Everett et al. 1999) Sachse et al. 2015
type strain of Chlamydia abortus: ATCC:VR-656, personal::B577, DSM:27654, GIMC:2006:CabB577
homotypic synonym:
"Chlamydia abortus" (Everett et al. 1999) Kuo et al. 2011, effective name 1)
Chlamydophila abortus Everett et al. 1999
NCBI BLAST name: chlamydias
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
heterotypic synonym
Chlamydia psittaci serotype 1
in-part
Chlamydia psittaci (Lillie 1930) Page 1968
Lineage( full )
cellular organisms; Bacteria; Pseudomonadati; PVC group; Chlamydiota; Chlamydiia; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia
   Entrez records   
Database name Subtree links Direct links Links from type
Nucleotide 9,948 9,856 16
Protein 87,263 85,126 -
Structure 2 1 -
PubMed Central 589 589 -
Gene 5,127 3,103 -
SRA Experiments 117 115 -
Protein Clusters 859 859 -
Identical Protein Groups 18,281 18,201 -
BioProject 27 25 -
BioSample 120 115 2
Datasets Genome 77 74 -
Taxonomy 3 1 -

Notes:

Comments and References:

Chlamydophila abortus = Chlamydia psittaci (in part)
From Chlamydophila (LPSN link): "Chlamydophila abortus Everett et al. 1999 includes abortion isolates previously belonging to Chlamydia psittaci (Lillie 1930) Page 1968 (Approved Lists 1980)."
Everett KD et al. (1999)
Everett, K.D., Bush, R.M., Andersen, A.A. "Emended description of the order Chlamydiales, proposal of Parachlamydiaceae fam. nov. and Simkaniaceae fam. nov., each containing one monotypic genus, revised taxonomy of the family Chlamydiaceae, including a new genus and five new species, and standards for the identification of organisms." Int. J. Syst. Bacteriol. (1999) 49(2):415-440.
Kuo CC et al. (2011)
Kuo, C.-C., Stephens, R.S., Bavoil, P.M., and Kaltenboeck, B. "Genus I. Chlamydia Jones, Rake and Stearns 1945, 55AL." In: Bergey's Manual of Systematic Bacteriology, 2nd ed., vol. 4 (The Bacteroidetes, Spirochaetes, Tenericutes (Mollicutes), Acidobacteria, Fibrobacteres, Fusobacteria, Dictyglomi, Gemmatimonadetes, Lentisphaerae, Verrumicrobia, Chlamydiae, and Planctomycetes) (N.R. Krieg, J.T. Staley, D.R. Brown, B.P. Hedlund, B.J. Paster, N.L. Ward, W. Ludwig, and W.B. Whitman, eds.), Springer-Verlag, New York (2011). pp. 846-865. [No PubMed record available.]
Sachse K et al. (2015)
Sachse, K., Bavoil, P.M., Kaltenboeck, B., Stephens, R.S., Kuo, C.-C., Rossello-Mora, R., and Horn, M. "Emendation of the family Chlamydiaceae: proposal of a single genus, Chlamydia, to include all currently recognized species." Syst. Appl. Microbiol. (2015) 38(2):99-103.
VALIDATION LIST No. 164 (2015)
Validation List No. 164: "List of new names and new combinations previously effectively, but not validly, published." Int. J. Syst. Evol. Microbiol. (2015) 65:2017-2025.
Van Loock M et al. (2003)
Van Loock, M., Vanrompay, D., Herrmann, B., Vander Stappen, J., Volckaert, G., Goddeeris, B.M., and Everett, K.D.E. "Missing links in the divergence of Chlamydophila abortus from Chlamydophila psittaci." Int. J. Syst. Evol. Microbiol. (2003) 53:761-770.
Zaręba-Marchewka K et al. (2021), doi:10.3390/pathogens10111405
Zaręba-Marchewka, K., Szymańska-Czerwińska, M., Livingstone, M., Longbottom, D., and Niemczuk, K. "Whole genome sequencing and comparative genome analyses of Chlamydia abortus strains of avian origin suggests that Chlamydia abortus species should be expanded to include avian and mammalian subgroups." Pathogens (2021) 10(11):1405.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Chlamydia abortus meta-databases BacDive - Free access to bacterial information database
20 records from this provider organism-specific BioCyc
GOLD: 14 Organisms organism-specific Genomes On Line Database
Related Immune Epitope Information gene/protein/disease-specific Immune Epitope Database and Analysis Resource
7 records from this provider organism-specific Integrated Microbial Genomes
Chlamydia abortus | SeqCode Registry taxonomy/phylogenetic SeqCode Registry
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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