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Taxonomy browser (Escherichia coli K-12)

Escherichia coli K-12

Taxonomy ID: 83333 (for references in articles please use NCBI:txid83333)
Scientific name: Escherichia coli K-12
Inherited blast name: enterobacteria
Rank: no rank
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
equivalent name: Escherichia coli K12
Lineage( full )
cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
   Entrez records   
Database name Subtree links Direct links
Nucleotide 2,833 1,711
Nucleotide GSS 165 -
Protein 158,870 82,648
Structure 2,760 2,614
Genome 1 1
Popset 11 10
Conserved Domains 16 16
GEO Datasets 4,453 969
PubMed Central 99 -
Gene 26,117 333
SRA Experiments 5,398 937
GEO Profiles 98,042 67,418
Bio Project 619 246
Bio Sample 5,596 1,016
Bio Systems 1,556 -
Assembly 41 15
Probe 303 72
PubChem BioAssay 936 678
Taxonomy 36 1

Genome Information

   Trace records (raw single-pass reads of DNA sequence)   
Sequencing Center Name
Record counts per type
454 ALL
454MSC - 454 Life Sciences
1,113,464 1,113,464
Totals per type
1,113,464 1,113,464

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Escherichia coli meta-databases BacDive
dryaddb supplemental materials Dryad Digital Repository
4 records from this provider organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Escherichia coli K-12 culture/stock collections Global Catalogue of Microorganisms
Related Immune Epitope Information gene/protein/disease-specific Immune Epitope Database and Analysis Resource
5 records from provider organism-specific Integrated Microbial Genomes
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

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