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Entrez PubMed Nucleotide Protein Genome Structure PMC Taxonomy BioCollections
   
   Entrez records   
Database name Direct links Subtree links Links from type
BioProject 270 309 -
BioSample 7,602 8,276 -
Conserved Domains 6 7 -
GEO DataSets 622 1,493 -
Gene 10,226 15,334 -
Identical Protein Groups 354,582 355,933 -
Nucleotide 179,859 180,747 351
PubChem BioAssay 276 277 -
PMC 5,585 5,585 -
Protein 1,583,842 1,599,271 -
SRA 5,127 5,769 -
Structure 181 548 -
Taxonomy 29 29 -

Bacteroides thetaiotaomicron

Taxonomy ID: 818 (for references in articles please use ncbitaxon:818)
current name
Bacteroides thetaiotaomicron  (Distaso 1912) Castellani and Chalmers 1919 (Approved Lists 1980) emend. Hahnke et al. 2016
type strain of Bacteroides thetaiotaomicron: ATCC : 29148 , CCUG : 10774 , CIP : 104206 , DSM : 2079 , JCM : 5827 , NCTC : 10582 , VPI : 5482
includes:
Bacteroides sp. 1_1_6
bacterium NLAE-zl-H492
bacterium NLAE-zl-H463
bacterium NLAE-zl-H207
bacterium NLAE-zl-G288
bacterium NLAE-zl-P699
bacterium NLAE-zl-P32
bacterium NLAE-zl-C579
bacterium NLAE-zl-C523
homotypic synonym:
"Sphaerocillus thetaiotaomicron"  (Distaso 1912) Prevot 1938 , effective name  1)
"Bacillus thetaiotaomicron"  Distaso 1912 , effective name  2)
"Pseudobacterium thetaiotaomicron"  (Distaso 1912) Krasil'nikov 1949 , effective name  3)
"Bacteroides fragilis subsp. thetaiotaomicron"  (Distaso 1912) Holdeman and Moore 1970 , effective name  4)
NCBI BLAST name: CFB group bacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage(full)
cellular organisms; Bacteria; Pseudomonadati; FCB group; Bacteroidota/Chlorobiota group; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides

Notes:

Comments and References:

Castellani A & Chalmers AJ (1919)
Castellani, A., and Chalmers, A.J. Manual of Tropical Medicine, 3rd ed. (1919). Williams Wood and Co., New York. [No PubMed abstract available.]
Cato EP & Johnson JL (1976)
Cato, E.P., and Johnson, J.L. "Reinstatement of species rank for Bacteroides fragilis, B. ovatus, B. distasonis, B. thetaiotaomicron, and B. vulgatus: Designation of neotype strains for Bacteroides fragilis (Veillon and Zuber) Castellani and Chalmers and Bacteroides thetaiotaomicron (Distaso) Castellani and Chalmers." Int. J. Syst. Bacteriol. (1976) 26(2):230-237. [No PubMed record available.]
Distaso A (1912)
Distaso, A. "Contribution a l'etude sur l'intoxication intestinale." Zentralbl. Bakteriol. Parasitenkd. Infektionskr. Hyg. Abt. I (1912) 62:433-468. [No PubMed record available.]
Hahnke RL et al. (2016)
Hahnke, R.L., Meier-Kolthoff, J.P., García-López, M., Mukherjee, S., Huntemann, M., Ivanova, N.N., Woyke, T., Kyrpides, N.C., Klenk, H.-P., and Göker, M. "Genome-based taxonomic classification of Bacteroidetes." Front. Microbiol. (2016) 7:2003.
Holdeman LV & Moore WEC (1970b)
Holdeman, L.V., and Moore, W.E.C. "Bacteroides." In: E.P. Cato, C.S. Cummins, L.V. Holdeman, J.L. Johnson, W.E.C. Moore, R.M. Smibert, and L.DS. Smith (eds.), Outline of Clinical Methods in Anaerobic Bacteriology, 2nd revision, Virginia Polytechnic Institute, Anaerobe Laboratory, Blacksburg, Virginia, (1970). pp. 33-44. [No PubMed record available.]
List of Changes in Taxonomic Opinion No. 26 (2017)
"Notification of changes in taxonomic opinion previously published outside the IJSEM." Int. J. Syst. Evol. Microbiol. (2017) 67(7):2081-2086.
Krasil'nikov NA (1949)
Krasil'nikov, N.A.: Guide to the Bacteria and Actinomycetes [Opredelitelv Bakterii i Actinomicetov], (1949). Akad. Nauk SSSR, Moscow, pp. 1-830. [No PubMed record available.]
Prévot AR (1938c)
Prévot, A.R. "Etudes de systematique bacterienne." Ann. Inst. Pasteur (Paris) (1938) 60:285-307. [No PubMed record available.]
Skerman VBD et al. (1980)
Skerman, V.B.D., McGowan, V., and Sneath, P.H.A. (editors). "Approved lists of bacterial names." Int. J. Syst. Bacteriol. (1980) 30(1):225-420. [No PubMed record available.]

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Bacteroides thetaiotaomicron type strain (BD-ID 1599) meta-databases BacDive
Bacteroides thetaiotaomicron KLE1254 organism-specific BioCyc
Bacteroides thetaiotaomicron 1_1_6 organism-specific BioCyc
Bacteroides thetaiotaomicron KPPR-3 organism-specific BioCyc
Bacteroides thetaiotaomicron KPPR-3 organism-specific BioCyc
Bacteroides thetaiotaomicron KLE1254 organism-specific BioCyc
Bacteroides thetaiotaomicron 1_1_6 organism-specific BioCyc
Bacteroides thetaiotaomicron KLE1254 organism-specific BioCyc
Bacteroides thetaiotaomicron 1_1_6 organism-specific BioCyc
Bacteroides thetaiotaomicron KPPR-3 organism-specific BioCyc
dryaddb supplemental materials Dryad Digital Repository
Bacteroides thetaiotaomicron (Distaso 1912) Castellani and Chalmers 1919 (Approved Lists 1980) taxonomy/phylogenetic Encyclopedia of life
GOLD: 176 Organisms organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Bacteroides thetaiotaomicron culture/stock collections Global Catalogue of Microorganisms
2938028206: Bacteroides thetaiotaomicron 2789STDY5834899 organism-specific Integrated Microbial Genomes
2844364567: Bacteroides thetaiotaomicron 7330 organism-specific Integrated Microbial Genomes
8024248990: Bacteroides thetaiotaomicron AF24-19LB organism-specific Integrated Microbial Genomes
8005071064: Bacteroides thetaiotaomicron AF28-2 organism-specific Integrated Microbial Genomes
2978189822: Bacteroides thetaiotaomicron AF03-26 organism-specific Integrated Microbial Genomes
8024236051: Bacteroides thetaiotaomicron ATCC 29741 organism-specific Integrated Microbial Genomes
8024259109: Bacteroides thetaiotaomicron AF37-12 organism-specific Integrated Microbial Genomes
3004646831: Bacteroides thetaiotaomicron AM30-26 organism-specific Integrated Microbial Genomes
8005099057: Bacteroides thetaiotaomicron AF14-20 organism-specific Integrated Microbial Genomes
8024264548: Bacteroides thetaiotaomicron AM51-2 organism-specific Integrated Microbial Genomes
8024215071: Bacteroides thetaiotaomicron AM26-17LB organism-specific Integrated Microbial Genomes
8005093072: Bacteroides thetaiotaomicron 7330 organism-specific Integrated Microbial Genomes
8024253815: Bacteroides thetaiotaomicron 2789STDY5834846 organism-specific Integrated Microbial Genomes
8005056558: Bacteroides thetaiotaomicron 14-106904-2 organism-specific Integrated Microbial Genomes
2965248242: Bacteroides thetaiotaomicron C34 organism-specific Integrated Microbial Genomes
2984892730: Bacteroides thetaiotaomicron NCTC 10582 organism-specific Integrated Microbial Genomes
8083513765: Bacteroides thetaiotaomicron H-2209 organism-specific Integrated Microbial Genomes
2958361758: Bacteroides thetaiotaomicron AM15-10 organism-specific Integrated Microbial Genomes
3004641530: Bacteroides thetaiotaomicron 19_BTHE organism-specific Integrated Microbial Genomes
8119495620: Bacteroides thetaiotaomicron DSM 2079 organism-specific Integrated Microbial Genomes
8109328688: Bacteroides thetaiotaomicron DSM 2079 organism-specific Integrated Microbial Genomes
8115853185: Bacteroides thetaiotaomicron VPI 5482 organism-specific Integrated Microbial Genomes
8024209697: Bacteroides thetaiotaomicron VPI-5482 organism-specific Integrated Microbial Genomes
2513020028: Bacteroides thetaiotaomicron NLAE-zl-C523 organism-specific Integrated Microbial Genomes
2593339226: Bacteroides thetaiotaomicron KPPR-3 organism-specific Integrated Microbial Genomes
646206272: Bacteroides thetaiotaomicron 1_1_6 organism-specific Integrated Microbial Genomes
2515154066: Bacteroides thetaiotaomicron NLAE-zl-H463 organism-specific Integrated Microbial Genomes
2667527856: Bacteroides thetaiotaomicron 2e6A organism-specific Integrated Microbial Genomes
2513020032: Bacteroides thetaiotaomicron NLAE-zl-P699 organism-specific Integrated Microbial Genomes
2515154067: Bacteroides thetaiotaomicron NLAE-zl-H492 organism-specific Integrated Microbial Genomes
2515154063: Bacteroides thetaiotaomicron NLAE-zl-H207 organism-specific Integrated Microbial Genomes
2667527938: Bacteroides thetaiotaomicron 3a5B organism-specific Integrated Microbial Genomes
2513020029: Bacteroides thetaiotaomicron NLAE-zl-P32 organism-specific Integrated Microbial Genomes
2514885004: Bacteroides thetaiotaomicron NLAE-zl-G288 organism-specific Integrated Microbial Genomes
2654588179: Bacteroides thetaiotaomicron NLAE-zl-C579 organism-specific Integrated Microbial Genomes
2879368307: Bacteroides thetaiotaomicron AM09-21 organism-specific Integrated Microbial Genomes
8024225950: Bacteroides thetaiotaomicron 2789STDY5834945 organism-specific Integrated Microbial Genomes
8024231052: Bacteroides thetaiotaomicron KLE1254 organism-specific Integrated Microbial Genomes
3004635663: Bacteroides thetaiotaomicron AF45-16BH organism-specific Integrated Microbial Genomes
8024204699: Bacteroides thetaiotaomicron 2789STDY5608873 organism-specific Integrated Microbial Genomes
8024219808: Bacteroides thetaiotaomicron OF05-16BH organism-specific Integrated Microbial Genomes
2978295447: Bacteroides thetaiotaomicron OF03-10BH organism-specific Integrated Microbial Genomes
Bacteroides thetaiotaomicron | SeqCode Registry taxonomy/phylogenetic SeqCode Registry
Bacteroides thetaiotaomicron type strain (SI-ID 39378) meta-databases StrainInfo, Leibniz Institute DSMZ
Notes:
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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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