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Taxonomy browser (Paracidovorax citrulli)

Paracidovorax citrulli

Taxonomy ID: 80869 (for references in articles please use NCBI:txid80869)
current name
Paracidovorax citrulli (Schaad et al. 1978) Du et al. 2023 in [Validation List No. 211 (2023), Du J et al. (2023)]
basionym:
Pseudomonas pseudoalcaligenes subsp. citrulli Schaad et al. 1978 (Approved Lists 1980), nom. approb. 1) in [Skerman VBD et al. (1980)]
type strain of Pseudomonas pseudoalcaligenes subsp. citrulli: ATCC:29625, CCUG:17393, CFBP:4459, CIP:106436, IBSBF:1851, ICMP:7500, ICPB:30064, BCCM/LMG:5376, NCPPB:3679, personal::FC-247, DSM:17060
homotypic synonym:
Pseudomonas avenae subsp. citrulli (Schaad et al. 1978) Hu et al. 1991
Acidovorax citrulli (Schaad et al. 1978) Schaad et al. 2009
Pseudomonas pseudoalcaligenes citrulli
Acidovorax avenae subsp. citrulli (Schaad et al. 1978) Willems et al. 1992
includes:
Pseudomonas sp. NRRL B-12227
equivalent:
Acidivorax citrulli
NCBI BLAST name: b-proteobacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria; Burkholderiales; Comamonadaceae; Paracidovorax
   Entrez records   
Database name Subtree links Direct links Links from type
Nucleotide 4,092 1,780 177
Protein 88,696 83,666 -
Structure 1 - -
PubMed Central 265 265 -
Gene 18,915 9,063 -
SRA Experiments 42 39 -
Protein Clusters 3,385 3,385 -
Identical Protein Groups 12,611 12,258 -
BioProject 34 32 -
BioSample 74 71 3
Datasets Genome 26 24 -
PubChem BioAssay 1 1 -
Taxonomy 3 1 -

Notes:

Comments and References:
Validation List No. 211 (2023), PubMed: abstract
Validation List no. 211. "Valid publication of new names and new combinations effectively published outside the IJSEM." Int. J. Syst. Evol. Microbiol. (2023) 73(5):005845.
Du J et al. (2023), PubMed: abstract
Du, J., Liu, Y., and Zhu, H. "Genome-based analyses of the genus Acidovorax: proposal of the two novel genera Paracidovorax gen. nov., Paenacidovorax gen. nov. and the reclassification of Acidovorax antarcticus as Comamonas antarctica comb. nov. and emended description of the genus Acidovorax." Arch. Microbiol. (2023) 205(1):42.
Skerman VBD et al. (1980)
Skerman, V.B.D., McGowan, V., and Sneath, P.H.A. "Approved Lists of Bacterial Names." Intl. J. Syst. Bacteriol. (1980) 30(1):225-420.
Hu FP et al. (1991)
Hu, F.P., Young, J.M., and Triggs, C.M. "Numerical analysis and determinative tests for nonfluorescent plant-pathogenic Pseudomonas spp. and genomic analysis and reclassification of species related to Pseudomonas avenae Manns 1909." Int. J. Syst. Bacteriol. (1991) 41:516-525. [No PubMed record available.]
Schaad NW et al. (2008)
Schaad, N.W., Postnikova, E., Sechler, A., Claflin, L.E., Vidaver, A.K., Jones, J.B., Agarkova, I., Ignatov, A., Dickstein, E., and Ramundo, B.A. "Reclassification of subspecies of Acidovorax avenae as A. Avenae (Manns 1905) emend., A. cattleyae (Pavarino, 1911) comb. nov., A. citrulli Schaad et al., 1978) comb. nov., and proposal of A. oryzae sp. nov." Syst. Appl. Microbiol. (2008) 31:434-446.
VALIDATION LIST No. 127 (2009), other link:https://ijs.microbiologyresearch.org/content/journal/ijsem/59/5?
Validation List No. 127: "List of new names and new combinations previously effectively, but not validly, published." Int. J. Syst. Evol. Microbiol. (2009) 59:923-925. [Erratum: Int. J. Syst. Evol. Microbiol. (2009) 59:1851.]
Willems A et al. (1992)
Willems, A., Goor, M., Thielemans, S., Gillis, M., Kersters, K., and De Ley, J. "Transfer of several phytopathogenic Pseudomonas species to Acidovorax as Acidovorax avenae subsp. avenae subsp. nov., comb. nov., Acidovorax avenae subsp. citrulli, Acidovorax avenae subsp. cattleyae, and Acidovorax konjaci." Int. J. Syst. Bacteriol. (1992) 42:107-119.
Young JM et al. (1996) (reference with type strain information)
Young, J.M., Saddler, G.S., Takikawa, Y., De Boer, S.H., Vauterin, L., Gardan, L., Gvozdyak, R.I., and Stead, D.E. "Names of plant pathogenic bacteria 1864-1995." Rev. Plant Pathol. (1996) 75:721-763. [No PubMed record available.]

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Acidovorax citrulli meta-databases BacDive - Free access to bacterial information database
GOLD: 13 Organisms organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Acidovorax citrulli culture/stock collections Global Catalogue of Microorganisms
9 records from this provider organism-specific Integrated Microbial Genomes
Paracidovorax citrulli | SeqCode Registry taxonomy/phylogenetic SeqCode Registry
Acidovorax avenae subsp. citrulli taxonomy/phylogenetic Systematic Mycology and Microbiology Laboratory, Fungal Databases
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Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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