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Taxonomy browser (Danio rerio)

Danio rerio

Taxonomy ID: 7955 (for references in articles please use NCBI:txid7955)
current name
Danio rerio (Hamilton, 1822)
basionym:
Cyprinus rerio Hamilton, 1822
homotypic synonym:
Brachydanio rerio
Genbank common name: zebrafish
NCBI BLAST name: bony fishes
Rank: species
Genetic code: Translation table 1 (Standard)
Mitochondrial genetic code: Translation table 2 (Vertebrate Mitochondrial)
Other names:
heterotypic synonym
Brachydanio rerio frankei
heterotypic synonym
Danio frankei
heterotypic synonym
Danio rerio frankei
common name(s) leopard danio, zebra danio, zebra fish
Lineage( full )
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Osteoglossocephalai; Clupeocephala; Otomorpha; Ostariophysi; Otophysi; Cypriniphysae; Cypriniformes; Cyprinoidei; Danionidae; Danioninae; Danio
   Entrez records   
Database name Direct links
Nucleotide 1,902,919
Protein 90,231
Structure 616
Conserved Domains 2
GEO Datasets 50,333
PubMed Central 27,652
Gene 109,924
HomoloGene 14,559
SRA Experiments 143,954
GEO Profiles 328,737
Protein Clusters 1
Identical Protein Groups 61,824
BioProject 3,633
BioSample 109,420
Datasets Genome 27
PubChem BioAssay 2,196
Taxonomy 1

Comments and References:

image:Danio rerio
Image by Azul from Wikimedia Commons under a Public Domain license.
* Image may not have been verified for accuracy by NCBI Taxonomy.

Genome Information

See the NCBI Genome homepage
Go to NCBI genomic BLAST page for Danio rerio

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
DNA barcoding : Danio rerio taxonomy/phylogenetic Barcodes of Life
46 records from this provider supplemental materials Dryad Digital Repository
GOLD: 11 Organisms organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Related Immune Epitope Information gene/protein/disease-specific Immune Epitope Database and Analysis Resource
639469800: Danio rerio Tuebingen organism-specific Integrated Microbial Genomes
Danio rerio (Hamilton, 1822) taxonomy/phylogenetic Integrated Taxonomic Information System
Danio rerio taxonomy/phylogenetic Lifemap
Zebrafish Model Organism Database taxonomy/phylogenetic NCBI taxonomy bookmarks
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Cyprinus rerio Hamilton, 1822 taxonomy/phylogenetic Ocean Biogeographic Information System
2 records from this provider taxonomy/phylogenetic Plazi
UCSCgb sequence screening/similarity/alignment UCSC Genome Browser
2 records from this provider organism-specific WebScipio - eukaryotic gene identification
4 records from this provider taxonomy/phylogenetic World Register of Marine Species
3 records from this provider organism-specific diArk - a resource for eukaryotic genome research
Wikipedia taxonomy/phylogenetic iPhylo
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

Show organism modifiers


Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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