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Taxonomy browser (Orientia tsutsugamushi)

Orientia tsutsugamushi

Taxonomy ID: 784 (for references in articles please use NCBI:txid784)
current name
Orientia tsutsugamushi (Hayashi 1920) Tamura et al. 1995
type strain of Orientia tsutsugamushi: ATCC:VR-150, personal::Karp
homotypic synonym:
"Theileria tsutsugamushi" Hayashi 1920, effective name 1)
Rickettsia tsutsugamushi (Hayashi 1920) Ogata 1931 (Approved Lists 1980)
NCBI BLAST name: a-proteobacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
heterotypic synonym
"Rickettsia orientalis" Nagayo et al. 1930, effective name 2)
heterotypic synonym
"Rickettsia akamushi" Kawamura and Imagawa 1931, effective name 3)
Lineage( full )
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria; Rickettsiales; Rickettsiaceae; Rickettsieae; Orientia
   Entrez records   
Database name Subtree links Direct links Links from type
Nucleotide 9,419 7,288 411
Protein 83,598 58,309 -
Structure 5 1 -
Conserved Domains 2 1 -
GEO Datasets 12 12 -
PubMed Central 2,028 2,028 -
Gene 18,259 6,650 -
SRA Experiments 341 290 -
Protein Clusters 745 745 -
Identical Protein Groups 41,659 31,679 -
BioProject 35 14 -
BioSample 310 290 8
Datasets Genome 31 18 -
PubChem BioAssay 1 1 -
Taxonomy 22 1 -

Notes:

Comments and References:

Hayashi N (1920)
Hayashi, N. "Etiology of tsutsugamushi disease." J. Parasitol. (1920) 7:53-68. [No PubMed record available.]
Kumura K et al. (1991)
Kumura, K., Minamishima, Y., Yamamoto, S., Ohashi, N., and Tamura, A. "DNA base composition of Rickettsia tsutsugamushi determined by reversed-phase high-performance liquid chromatography." Int. J. Syst. Bacteriol. (1991) 41:247-248.
Nagayo M et al. (1930)
Nagayo, M., Tamiya, T., Mitamura, T., and Sato, K. "On the virus of tsutsugamushi disease and its demonstration by a new method." Jpn. J. Exp. Med. (1930) 8:309-318. [No PubMed record available.]
Ogata N (1931)
Ogata, N. "Aetiologie der Tsutsugamuchi-Krankheit: Rickettsia tsutsugamushi." Zentralbl. Bakteriol. Parasitenkd. Infektionskr. Hyg. Abt. I Orig. (1931) 122:249-253. [No PubMed record available.]
Skerman VBD et al. (1980) (Rickettsia tsutsugamushi)
Skerman, V.B.D., McGowan, V., and Sneath, P.H.A. (editors): "Approved lists of bacterial names." Int. J. Syst. Bacteriol. (1980) 30:225-420.
Tamura A et al. (1995)
Tamura, A., Ohashi, N., Urakami, H., and Miyamura, S. "Classification of Rickettsia tsutsugamushi in a new genus, Orientia gen. nov., as Orientia tsutsugamushi comb. nov." Int. J. Syst. Bacteriol. (1995) 45:589-591.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Orientia tsutsugamushi (Hayashi 1920) Tamura et al. 1995 taxonomy/phylogenetic Encyclopedia of life
GOLD: 8 Organisms organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Related Immune Epitope Information gene/protein/disease-specific Immune Epitope Database and Analysis Resource
8 records from this provider organism-specific Integrated Microbial Genomes
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Orientia tsutsugamushi (T) | SeqCode Registry taxonomy/phylogenetic SeqCode Registry
Wikipedia taxonomy/phylogenetic iPhylo
Notes:
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Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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