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Taxonomy browser (Ciona intestinalis)

Ciona intestinalis

Taxonomy ID: 7719 (for references in articles please use NCBI:txid7719)
current name
Ciona intestinalis (Linnaeus, 1767)
homotypic synonym:
Ascidia intestinalis
Genbank common name: vase tunicate
NCBI BLAST name: tunicates
Rank: species
Genetic code: Translation table 1 (Standard)
Mitochondrial genetic code: Translation table 13 (Ascidian Mitochondrial)
Other names:
common name(s) sea vase, yellow sea squirt
Lineage( full )
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Tunicata; Ascidiacea; Phlebobranchia; Cionidae; Ciona
   Entrez records   
Database name Subtree links Direct links
Nucleotide 1,250,026 1,250,025
Protein 23,912 23,899
Structure 19 19
Genome 1 1
Popset 47 47
Conserved Domains 1 1
GEO Datasets 641 641
PubMed Central 4,321 4,321
Gene 21,136 21,097
SRA Experiments 992 992
Protein Clusters 12 12
Identical Protein Groups 20,862 20,862
BioProject 109 107
BioSample 937 937
Assembly 7 7
Taxonomy 2 1

Comments and References:

image:Ciona intestinalis

Genome Information

Go to NCBI genomic BLAST page for Ciona intestinalis
Genome view: 14 chromosomes
Names 1 2 3 4 5 6 7 8 9 10 11 12 13 14

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Ciona intestinalis taxonomy/phylogenetic Animal Diversity Web
Ciona intestinalis taxonomy taxonomy/phylogenetic Arctos Specimen Database
DNA barcoding : Ciona intestinalis taxonomy/phylogenetic Barcodes of Life
dryaddb supplemental materials Dryad Digital Repository
Ciona intestinalis (Linnaeus, 1767) taxonomy/phylogenetic Encyclopedia of life
GOLD: Go0000662 organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
2507525001: Ciona intestinalis organism-specific Integrated Microbial Genomes
Ciona intestinalis (Linnaeus, 1767) taxonomy/phylogenetic Integrated Taxonomic Information System
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
2 records from this provider taxonomy/phylogenetic Ocean Biogeographic Information System
plazi taxonomy/phylogenetic Plazi
WebScipio: Ciona intestinalis organism-specific WebScipio - eukaryotic gene identification
Ascidia intestinalis Linnaeus, 1767 taxonomy/phylogenetic World Register of Marine Species
diArk: Ciona intestinalis organism-specific diArk - a resource for eukaryotic genome research
Wikipedia taxonomy/phylogenetic iPhylo
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

Show organism modifiers

Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.

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