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Database name Direct links Subtree links Links from type
BioProject 86 90 -
BioSample 2,442 2,465 -
GEO DataSets - 654 -
Gene 7,947 12,361 -
Identical Protein Groups 190,279 191,684 -
Nucleotide 26,972 28,005 73
PubChem BioAssay 15 15 -
PMC 1,343 1,343 -
Protein 183,757 188,825 -
SRA 388 425 -
Structure 3 5 -
Taxonomy 25 25 -

Collinsella aerofaciens

Taxonomy ID: 74426 (for references in articles please use ncbitaxon:74426)
current name
Collinsella aerofaciens  (Eggerth 1935) Kageyama et al. 1999
type strain of Collinsella aerofaciens: ATCC : 25986 , CCUG : 28087 , DSM : 3979 , JCM : 10188 , NCTC : 11838 , VPI : 1003
homotypic synonym:
Eubacterium aerofaciens  (Eggerth 1935) Prevot 1938 (Approved Lists 1980)
"Bacteroides aerofaciens"  Eggerth 1935 , effective name  1)
"Pseudobacterium aerofaciens"  (Eggerth 1935) Krasil'nikov 1949 , effective name  2)
NCBI BLAST name: actinobacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage(full)
cellular organisms; Bacteria; Bacillati; Actinomycetota; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella

Notes:

Comments and References:

Han KI et al. (2021) , Pubmed: abstract
Han, K.-I., Kim, J.-S., Eom, M.K., Lee, K.C., Suh, M.K., Kim, H.S., Park, S.-H., Lee, J.H., Kang, S.W., Park, J.-E., Oh, B.S., Ryu, S.W., Yu, S.Y., Choi, S.-H., Lee, D.H., Yoon, H., Kim, B.-Y., Lee, J.H., and Lee, J.-S. "Collinsella acetigenes sp. nov., an anaerobic actinobacterium isolated from human feces, and emended description of the genus Collinsella and Collinsella aerofaciens." Curr. Microbiol. (2021) 78(10):3667-3673.
Kageyama A et al. (1999a)
Kageyama, A., Benno, Y., and Nakase, T. "Phylogenetic and phenotypic evidence for the transfer of Eubacterium aerofaciens to the genus Collinsella as Collinsella aerofaciens gen. nov., comb. nov." Int. J. Syst. Bacteriol. (1999) 49:557-565.
Skerman VBD et al. (1980) (Eubacterium aerofaciens)
Skerman, V.B.D., McGowan, V., and Sneath, P.H.A. (editors): "Approved lists of bacterial names." Int. J. Syst. Bacteriol. (1980) 30:225-420.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Collinsella aerofaciens type strain (BD-ID 3044) meta-databases BacDive
Collinsella aerofaciens D40t1_170626_B5 organism-specific BioCyc
Collinsella aerofaciens C11 organism-specific BioCyc
Collinsella aerofaciens indica organism-specific BioCyc
Collinsella aerofaciens P10wA7 organism-specific BioCyc
Collinsella aerofaciens D40t1_170626_B5 organism-specific BioCyc
Collinsella aerofaciens P10wA7 organism-specific BioCyc
Collinsella aerofaciens indica organism-specific BioCyc
Collinsella aerofaciens C11 organism-specific BioCyc
Collinsella aerofaciens C11 organism-specific BioCyc
Collinsella aerofaciens P10wA7 organism-specific BioCyc
Collinsella aerofaciens D40t1_170626_B5 organism-specific BioCyc
Collinsella aerofaciens indica organism-specific BioCyc
Collinsella aerofaciens (Eggerth 1935) Kageyama et al. 1999 taxonomy/phylogenetic Encyclopedia of life
GOLD: 96 Organisms organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Collinsella aerofaciens culture/stock collections Global Catalogue of Microorganisms
3003409864: Collinsella aerofaciens 1001099B_141217_A1 organism-specific Integrated Microbial Genomes
2915800224: Collinsella aerofaciens BIOML-A14 organism-specific Integrated Microbial Genomes
2915798186: Collinsella aerofaciens BIOML-A17 organism-specific Integrated Microbial Genomes
2915778183: Collinsella aerofaciens BIOML-A1 organism-specific Integrated Microbial Genomes
8071055486: Collinsella aerofaciens BSD2780120874b_170522_H1 organism-specific Integrated Microbial Genomes
8073823505: Collinsella aerofaciens MSK.8.35 organism-specific Integrated Microbial Genomes
8071095709: Collinsella aerofaciens D6t1_180914_F6 organism-specific Integrated Microbial Genomes
2915806283: Collinsella aerofaciens BIOML-A12 organism-specific Integrated Microbial Genomes
2915788120: Collinsella aerofaciens BIOML-A11 organism-specific Integrated Microbial Genomes
2915784184: Collinsella aerofaciens BIOML-A4 organism-specific Integrated Microbial Genomes
8071046584: Collinsella aerofaciens DSM_13712 organism-specific Integrated Microbial Genomes
8071093634: Collinsella aerofaciens 1001095IJ_161003_A3 organism-specific Integrated Microbial Genomes
2915780144: Collinsella aerofaciens BIOML-A13 organism-specific Integrated Microbial Genomes
2915802177: Collinsella aerofaciens BIOML-A10 organism-specific Integrated Microbial Genomes
2915808283: Collinsella aerofaciens BIOML-A15 organism-specific Integrated Microbial Genomes
8071029066: Collinsella aerofaciens BSD2780061688st1_F5 organism-specific Integrated Microbial Genomes
8073863000: Collinsella aerofaciens D54t1_190329_E10 organism-specific Integrated Microbial Genomes
8073922046: Collinsella aerofaciens DFI.1.227 organism-specific Integrated Microbial Genomes
8071050600: Collinsella aerofaciens 1001095IJ_161003_F6 organism-specific Integrated Microbial Genomes
8073868118: Collinsella aerofaciens 1001713B170221_170320_E2 organism-specific Integrated Microbial Genomes
2915790220: Collinsella aerofaciens BIOML-A5 organism-specific Integrated Microbial Genomes
2802429433: Collinsella aerofaciens 2789STDY5608823 organism-specific Integrated Microbial Genomes
2802429506: Collinsella aerofaciens 2789STDY5608842 organism-specific Integrated Microbial Genomes
2841182176: Collinsella aerofaciens C11 organism-specific Integrated Microbial Genomes
2814123380: Collinsella aerofaciens NCTC 11838 organism-specific Integrated Microbial Genomes
2802429283: Collinsella aerofaciens indica organism-specific Integrated Microbial Genomes
2802429484: Collinsella aerofaciens 2789STDY5834902 organism-specific Integrated Microbial Genomes
2915792171: Collinsella aerofaciens BIOML-A3 organism-specific Integrated Microbial Genomes
2915776231: Collinsella aerofaciens BIOML-A6 organism-specific Integrated Microbial Genomes
2915782171: Collinsella aerofaciens BIOML-A18 organism-specific Integrated Microbial Genomes
2915804327: Collinsella aerofaciens BIOML-A7 organism-specific Integrated Microbial Genomes
8071062241: Collinsella aerofaciens D59t2_181005_D7 organism-specific Integrated Microbial Genomes
2915786137: Collinsella aerofaciens BIOML-A19 organism-specific Integrated Microbial Genomes
8073900446: Collinsella aerofaciens MSK.1.11 organism-specific Integrated Microbial Genomes
8071048651: Collinsella aerofaciens 1001136B_160425_H1 organism-specific Integrated Microbial Genomes
8073055019: Collinsella aerofaciens MCC370 organism-specific Integrated Microbial Genomes
8072610384: Collinsella aerofaciens NBRC 114504 organism-specific Integrated Microbial Genomes
2921084881: Collinsella aerofaciens BIOML-A20 organism-specific Integrated Microbial Genomes
8071007316: Collinsella aerofaciens MSK.1.10 organism-specific Integrated Microbial Genomes
Collinsella aerofaciens type strain (SI-ID 38740) meta-databases StrainInfo, Leibniz Institute DSMZ
Notes:
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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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