Taxonomy browser (Vibrio alginolyticus)

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Taxonomy browser (Vibrio alginolyticus)

Vibrio alginolyticus

Taxonomy ID: 663 (for references in articles please use NCBI:txid663)

current name

Vibrio alginolyticus (Miyamoto et al. 1961) Sakazaki 1968 (Approved Lists 1980) in [Skerman VBD et al. (1980)]

type strain of Vibrio alginolyticus: ATCC :17749, CAIM:516, CCUG :4989, CCUG :13445, CCUG :16315, CIP:103336, CIP:75.3, DSM :2171, IFO :15630, NBRC :15630, BCCM/LMG :4409, NCCB:71013, NCCB:77003, NCTC :12160

basionym:

"Oceanomonas alginolytica" Miyamoto et al. 1961, effective name¹⁾

homotypic synonym:

Beneckea alginolytica (Miyamoto et al. 1961) Baumann et al. 1971 (Approved Lists 1980), nom. approb.²⁾ in [Skerman VBD et al. (1980)]

includes:

Vibrio sp. PeIg0901

NCBI BLAST name: g-proteobacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:

heterotypic synonym

Pseudomonas creosotensis

Lineage( full ): cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio; Vibrio harveyi group

Entrez records
Database name	Subtree links	Direct links	Links from type
Nucleotide	48,322	47,819	300
Protein	575,428	557,145	-
Structure	42	42	-
GEO Datasets	23	23	-
PubMed Central	2,548	2,546	-
Gene	29,005	19,244	-
SRA Experiments	1,015	1,010	-
Protein Clusters	3,511	3,511	-
Identical Protein Groups	427,364	424,821	-
BioProject	209	205	-
BioSample	1,727	1,719	13
Datasets Genome	932	927	-
PubChem BioAssay	42	42	-
Taxonomy	5	1	-

Notes:

1) This taxonomic name has been effectively published but not validly published under the rules of the International Code of Nomenclature of Prokaryotes (Bacteriological Code).
2) 'Nom. approb.' (= nomen approbatum, = approved name) refers to a name which is included in the Approved Lists of Bacterial Names.

Comments and References:

Skerman VBD et al. (1980)

Skerman, V.B.D., McGowan, V., and Sneath, P.H.A. "Approved Lists of Bacterial Names." Intl. J. Syst. Bacteriol. (1980) 30(1):225-420.

Baumann P et al. (1971)

Baumann, P., Baumann, L., and Mandel, M. "Taxonomy of marine bacteria: the genus Beneckea." J. Bacteriol. (1971) 107:268-294.

Miyamoto Y et al. (1961)

Miyamoto, Y., Nakamura, K., and Takizawa, K. "Pathogenic halophiles. Proposals of a new genus 'Oceanomonas' and of the amended species names." Jpn. J. Microbiol. (1961) 5:477-481. [No PubMed record available.]

Sakazaki R (1968)

Sazaki, R. "Proposal of Vibrio alginolyticus for the biotype 2 of Vibrio parahaemolyticus." Jpn. J. Med. Sci. Biol. (1968) 21:359-362. [No abstract available.]

Turner JW et al. (2018)

Turner, J.W., Tallman, J.J., Macias, A., Pinnell, L.J., Elledge, N.C., Azadani, D.N., Nilsson, W.B., Paranjpye, R.N., Armbrust, E.V., and Strom, M.S. "Comparative genomic analysis of Vibrio diabolicus and six taxonomic synonyms: A first look at the distribution and diversity of the expanded species." Front. Microbiol. (2018) 9:1893.

External Information Resources (NCBI LinkOut)

LinkOut	Subject	LinkOut Provider
Vibrio alginolyticus	meta-databases	BacDive - Free access to bacterial information database
15 records from this provider	organism-specific	BioCyc
Beneckea alginolytica (Miyamoto et al. 1961) Baumann et al. 1971 (Approved Lists 1980)	taxonomy/phylogenetic	Encyclopedia of life
GOLD: 56 Organisms	organism-specific	Genomes On Line Database
Show Biotic Interactions	taxonomy/phylogenetic	Global Biotic Interactions
Vibrio alginolyticus	culture/stock collections	Global Catalogue of Microorganisms
37 records from this provider	organism-specific	Integrated Microbial Genomes
Vibrio alginolyticus	taxonomy/phylogenetic	Lifemap
3 records from this provider	taxonomy/phylogenetic	Ocean Biogeographic Information System
Vibrio alginolyticus \| SeqCode Registry	taxonomy/phylogenetic	SeqCode Registry
3 records from provider	taxonomy/phylogenetic	World Register of Marine Species

Notes:: Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.

Comments and questions to info@ncbi.nlm.nih.gov

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