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| Entrez | PubMed | Nucleotide | Protein | Genome | Structure | PMC | Taxonomy | BioCollections |
| Entrez records | |||
| Database name | Direct links | Subtree links | Links from type |
| BioProject | 82 | 4,181 | - |
| BioSample | 394 | 170,165 | - |
| Conserved Domains | 11 | 23 | - |
| GEO DataSets | - | 3,191 | - |
| Gene | - | 660,193 | - |
| GTR | - | 1 | - |
| Identical Protein Groups | 533,903 | 10,774,340 | - |
| Nucleotide | 18 | 2,990,996 | 45,497 |
| PubChem BioAssay | 4 | 986 | - |
| PMC | 51,816 | 51,885 | - |
| Protein | 537,491 | 27,151,737 | - |
| SRA | 362 | 45,410 | - |
| Structure | 1 | 1,345 | - |
| Taxonomy | 14,908 | 14,908 | - |
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Vibrio (LPSN link) |
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Beneckea (LPSN link) |
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Listonella (LPSN link) |
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Baumann P et al. (1971) Baumann, P., Baumann, L., and Mandel, M. "Taxonomy of marine bacteria: the genus Beneckea." J. Bacteriol. (1971) 107:268-294. |
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Baumann P et al. (1980)
Baumann, P., Baumann, L., Bang, S.S., and Woolkalis, M.J. "Reevaluation of the taxonomy of Vibrio, Beneckea, and Photobacterium: abolition of the genus Beneckea." Curr. Microbiol. (1980) 4:127-132. [No PubMed record available.]
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Dorsch M et al. (1992) Dorsch, M., Lane, D., and Stackebrandt, E. "Towards a phylogeny of the genus Vibrio based on 16S rRNA sequences." Int. J. Syst. Bacteriol. (1992) 42:58-63. |
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ICSB Subcommittee on the Taxonomy of Vibrionaceae (1998)
ICSB, Subcommittee on the Taxonomy of Vibrionaceae "Minutes of the meetings (Minute 8), 4 and 7 July 1994, Prague, Czech republic." Int. J. Syst. Bacteriol. (1998) 48:1467-1469. (Note: the genus Listonella is not well-defined and requires redfefinition.)
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MacDonell MT & Colwell RR (1985)
MacDonell, M.T., and Colwell, R.R. "Phylogeny of the Vibrionaceae, and recommendation for two new genera, Listonella and Shewanella." Syst. Appl. Microbiol. (1985) 6(2):171-182.
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Moreira APB et al. (2011) Moreira, A.P.B., Pereira, N. Jr., and Thompson, F.L. "Usefulness of a real-time PCR platform for G+C content and DNA-DNA hybridization estimations in vibrios." Int. J. Syst. Evol. Microbiol. (2011) 61:2379-2383. |
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Ruimy R et al. (1994) Ruimy, R., Breittmayer, V., Elbaze, P., Lafay, B., Boussemart, O., Gauthier, M., Christen, R. "Phylogenetic analysis and assessment of the genera Vibrio, Photobacterium, Aeromonas, and Plesiomonas deduced from small-subunit rRNA sequences." Int. J. Syst. Bacteriol. (1994) 44(3):416-426. |
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Sawabe T et al. (2013) Sawabe, T., Ogura, Y., Matsumura, Y., Gao, F., Amin, A.R., Mino, S., Nakagawa, S., Sawabe, T., Kumar, R., Fukui, Y., Satomi, M., Matsushima, R., Thompson, F.L., Bruno, G.G., Christen, R., Maruyama, F., Kurokawa, K., and Hayashi, T. "Updating the Vibrio clades defined by multilocus sequence phylogeny: proposal of eight new clades, and the description of Vibrio tritonius sp. nov." Front. Microbiol. (2013) 4:414. [Corrigendum: Front. Microbiol. (2014) 5:583 (PMID 25406895)] |
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Skerman VBD et al. (1980)
Skerman, V.B.D., McGowan, V., and Sneath, P.H.A. (editors). "Approved lists of bacterial names." Int. J. Syst. Bacteriol. (1980) 30(1):225-420. [No PubMed record available.]
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Skerman VBD et al. (1980) (Beneckea)
Skerman, V.B.D., McGowan, V., and Sneath, P.H.A. (editors): "Approved lists of bacterial names." Int. J. Syst. Bacteriol. (1980) 30:225-420.
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Thompson CC et al. (2007) Thompson, C.C., Thompson, F.L., Vicente, A.C., and Swings, J. "Phylogenetic analysis of vibrios and related species by means of atpA gene sequences." Int. J. Syst. Evol. Microbiol. (2007) 57:2480-2484. |
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Thompson FL et al. (2011) Thompson, F.L., Thompson, C.C., Dias, G.M., Naka, H., Dubay, C., and Crosa, J.H. "The genus Listonella MacDonell and Colwell 1986 is a later heterotypic synonym of the genus Vibrio Pacini 1854 (Approved Lists 1980)--a taxonomic opinion." Int. J. Syst. Evol. Microbiol. (2011) 61:3023-3027. |
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VALIDATION LIST No. 6 (1981) (Beneckea -> Vibrio)
VALIDATION LIST No. 6. Int. J. Syst. Bacteriol. (1981) 31:215-218.
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VALIDATION LIST No. 20 (1986) (Listonella)
VALIDATION LIST No. 20. Int. J. Syst. Bacteriol. (1986) 36:354-356.
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Wiik R et al. (1995) Wiik, R., Stackebrandt, E., Valle, O., Daae, F.L., Rodseth, O.M., and Andersen, K. "Classification of fish-pathogenic vibrios based on comparative 16S rRNA analysis." Int. J. Syst. Bacteriol. (1995) 45:421-428. |
Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.
Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.
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