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Taxonomy browser (Caenorhabditis elegans)

Caenorhabditis elegans

Taxonomy ID: 6239
Inherited blast name: nematodes
Rank: species
Genetic code: Translation table 1 (Standard)
Mitochondrial genetic code: Translation table 5 (Invertebrate Mitochondrial)
Other names:
synonym: Rhabditis elegans
common name: roundworm
authority: Rhabditis elegans Maupas, 1900
authority: Caenorhabditis elegans (Maupas, 1900)
Lineage( full )
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Protostomia; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
   Entrez records   
Database name Direct links
Nucleotide 76,286
Nucleotide EST 398,491
Protein 68,086
Structure 309
Genome 1
Popset 34
SNP 192,044
Domains 25
GEO Datasets 13,757
UniGene 23,151
PubMed Central 41,895
Gene 49,844
HomoloGene 4,291
SRA Experiments 12,337
Probe 186,754
Assembly 9
Bio Project 853
Bio Sample 12,213
Bio Systems 1,308
GEO Profiles 795,897
PubChem BioAssay 403
Protein Clusters 12
Taxonomy 1

Genome Information

See the NCBI Genome homepage
Go to NCBI genomic BLAST page for Caenorhabditis elegans
See the NCBI Genome map in MapViewer
   Trace records (raw single-pass reads of DNA sequence)   
Sequencing Center Name
Record counts per type
CLONEEND PCR RT-PCR ALL
INDIVIDUAL - Direct submission from individual investigator
- 430 - 430
NYUCGSB - New York University Center for Genomics & Systems Biology
- - 2,807 2,807
UWGL - University of Washington, Green Laboratory (UWGL)
- - 13,168 13,168
WU-LCG - Washington University Laboratory for Computational Genomics
- - 372 372
WUGSC - Washington University, Genome Sequencing Center
20 - - 20
Totals per type
20 430 16,347 16,797

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Caenorhabditis elegans taxonomy/phylogenetic Animal Diversity Web
DNA barcoding : Caenorhabditis elegans taxonomy/phylogenetic Barcodes of Life
dryaddb supplemental materials Dryad Digital Repository
Caenorhabditis elegans taxonomy/phylogenetic Encyclopedia of life
GOLD: Go0093621 organism-specific Genomes On Line Database
GOLD: Go0114114 organism-specific
GOLD: Go0116501 organism-specific
GOLD: Go0113856 organism-specific
GOLD: Go0038439 organism-specific
GOLD: Go0000770 organism-specific
GOLD: Go0007127 organism-specific
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Related Immune Epitope Information gene/protein/disease-specific Immune Epitope Database and Analysis Resource
639507900: Caenorhabditis elegans Bristol N2 organism-specific Integrated Microbial Genomes
Caenorhabditis elegans taxonomy/phylogenetic Integrated Taxonomic Information System
Caenorhabditis Genetics Center taxonomy/phylogenetic NCBI taxonomy bookmarks
Caenorhabditis elegans WWW Server taxonomy/phylogenetic
WormBase taxonomy/phylogenetic
AceView taxonomy/phylogenetic
WormBook taxonomy/phylogenetic
Sanger companies/research institutes The Sanger Centre
Caenorhabditis elegans taxonomy/phylogenetic TreeBase
WebScipio: Caenorhabditis elegans organism-specific WebScipio - eukaryotic gene identification
Caenorhabditis elegans taxonomy/phylogenetic World Register of Marine Species
diArk: Caenorhabditis elegans organism-specific diArk a resource for eukaryotic genome research
diArk: Caenorhabditis elegans CB4856 organism-specific
Wikipedia taxonomy/phylogenetic iPhylo
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.
To see LinkOut links in this lineage click here

Information from sequence entries

Show organism modifiers


Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.


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