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Taxonomy browser (Caenorhabditis briggsae)

Caenorhabditis briggsae

Taxonomy ID: 6238 (for references in articles please use NCBI:txid6238)
Scientific name: Caenorhabditis briggsae Dougherty & Nigon, 1949
includes: Caenorhabditis briggsae AF16
Inherited blast name: nematodes
Rank: species
Genetic code: Translation table 1 (Standard)
Mitochondrial genetic code: Translation table 5 (Invertebrate Mitochondrial)
Lineage( full )
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Protostomia; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
   Entrez records   
Database name Direct links
Nucleotide 23,672
Nucleotide EST 2,424
Nucleotide GSS 11,135
Protein 44,618
Genome 1
Popset 72
GEO Datasets 123
PubMed Central 1,108
Gene 19,484
SRA Experiments 144
Protein Clusters 12
Identical Protein Groups 31,806
Bio Project 23
Bio Sample 142
Bio Systems 234
Assembly 1
Probe 1
Taxonomy 1

Genome Information

Go to NCBI genomic BLAST page for Caenorhabditis briggsae
Genome view: 6 chromosomes
Names I II III IV V X
   Trace records (raw single-pass reads of DNA sequence)   
Sequencing Center Name
Record counts per type
SHOTGUN WGS ALL
SC - The Sanger Center
- 1,166,308 1,166,308
WUGSC - Washington University, Genome Sequencing Center
2,749 1,188,609 1,191,358
Totals per type
2,749 2,354,917 2,357,666

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Caenorhabditis briggsae taxonomy/phylogenetic Encyclopedia of life
GOLD: Go0000604 organism-specific Genomes On Line Database
Related Immune Epitope Information gene/protein/disease-specific Immune Epitope Database and Analysis Resource
Caenorhabditis briggsae taxonomy/phylogenetic Integrated Taxonomic Information System
Caenorhabditis briggsae taxonomy/phylogenetic Lifemap
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Caenorhabditis briggsae taxonomy/phylogenetic TreeBase
WebScipio: Caenorhabditis briggsae organism-specific WebScipio - eukaryotic gene identification
diArk: Caenorhabditis briggsae organism-specific diArk - a resource for eukaryotic genome research
Wikipedia taxonomy/phylogenetic iPhylo
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.


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