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Taxonomy browser (Shigella flexneri)

Shigella flexneri

Taxonomy ID: 623 (for references in articles please use NCBI:txid623)
Scientific name: Shigella flexneri Castellani and Chalmers 1919
type strain of Shigella flexneri: ATCC:29903
type strain of Shigella flexneri: CIP:82.48
type strain of Shigella flexneri: DSM:4782
equivalent: Escherichia/Shigella flexneri
Inherited blast name: enterobacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
synonym: "Shigella paradysenteriae" Weldin 1927, effective name 1)
Lineage( full )
cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Shigella
   Entrez records   
Database name Subtree links Direct links
Nucleotide 224,388 158,738
Nucleotide GSS 4 4
Protein 1,645,590 1,265,328
Structure 144 103
Genome 1 1
Popset 170 170
Conserved Domains 2 1
GEO Datasets 178 137
PubMed Central 7,278 7,278
Gene 19,693 183
SRA Experiments 5,213 4,699
Protein Clusters 3,064 3,064
Identical Protein Groups 116,989 83,498
Bio Project 129 59
Bio Sample 5,611 4,876
Bio Systems 2,418 649
Assembly 553 384
Probe 30 25
PubChem BioAssay 173 173
Taxonomy 113 1


Comments and References:

Castellani A & Chalmers AJ (1919)
Castellani, A., and Chalmers, A.J. Manual of Tropical Medicine, 3rd ed. (1919). Williams Wood and Co., New York. [No PubMed abstract available.]

Nota BeneSkerman VBD et al. (1980)
Skerman, V.B.D., McGowan, V., and Sneath, P.H.A. (editors). "Approved lists of bacterial names." Int. J. Syst. Bacteriol. (1980) 30:225-420. [No PubMed record available.]

Weldin JC (1927)
Weldin, J.C. "The colon-typhoid group of bacteria and related forms. Relationships and classification. " Iowa State J. Sci. (1927) 1:121-197. [No PubMed record available.]

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Shigella flexneri meta-databases BacDive
Shigella flexneri Castellani and Chalmers 1919 (Approved Lists 1980) taxonomy/phylogenetic Encyclopedia of life
7 records from this provider organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Shigella flexneri culture/stock collections Global Catalogue of Microorganisms
Related Immune Epitope Information gene/protein/disease-specific Immune Epitope Database and Analysis Resource
3 records from this provider organism-specific Integrated Microbial Genomes
Shigella flexneri taxonomy/phylogenetic Lifemap
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Shigella flexneri (taxon passport) culture/stock collections StrainInfo
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

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