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Entrez PubMed Nucleotide Protein Genome Structure PMC Taxonomy BioCollections
   
   Entrez records   
Database name Direct links Subtree links Links from type
BioProject 80 87 -
BioSample 1,950 1,992 -
GEO DataSets 39 95 -
Gene 9,355 18,883 -
Identical Protein Groups 114,441 115,863 -
Nucleotide 42,223 42,575 2,802
Protein 569,110 588,349 -
SRA 1,020 1,058 -
Structure 1 2 -
Taxonomy 25 25 -

Xanthomonas citri pv. citri

Taxonomy ID: 611301 (for references in articles please use ncbitaxon:611301)
current name
Xanthomonas citri pv. citri  (Hasse 1915) Constantin 2016
homotypic synonym:
Xanthomonas smithii subsp. citri pv. citri
"Xanthomonas smithii subsp. citri"  (Gabriel et al. 1989) Schaad et al. 2005 , effective name  1)
"Xanthomonas smithii subsp. citri"  (ex Hasse 1915) Schaad et al. 2005 , effective name  2)
Xanthomonas citri subsp. citri  (ex Hasse 1915) Gabriel et al. 1989
NCBI BLAST name: g-proteobacteria
Rank: no rank
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
heterotypic synonym Xanthomonas campestris pv. Citri (A group)
in-part Xanthomonas campestris pv. citri
Lineage(full)
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Lysobacterales; Lysobacteraceae; Xanthomonas; Xanthomonas citri group; Xanthomonas citri

Notes:

Comments and References:

Constantin EC et al. (2016)
Constantin, E.C., Cleenwerck, I., Maes, M., Baeyen, S., Van Malderghem, C., De Vos, P., and Cottyn, B. "Genetic characterization of strains named as Xanthomonas axonopodis pv. dieffenbachiae leads to a taxonomic revision of the X. axonopodis species complex." Plant Pathol. (2016) 65:792-806. [No PubMed record available.]
Gabriel DW et al. (1989)
Gabriel, D.W., Kingsley, M.T., Hunter, J.E., and Gottwyld, T. "Reinstatement of Xanthomonas citri (ex Hasse) and X. phaseoli (ex Smith) to species and reclassification of all X. campestris pv. citri strains." Int. J. Syst. Bacteriol. (1989) 39:14-22. [No PubMed record available.]
Hasse CH (1915)
Hasse, C.H. "Pseudomonas citri, the cause of citrus canker." J. Agr. Res. (1915) 4:97-100. [No PubMed record available.]
Schaad NW et al. (2005)
Schaad, N.W., Postnikova, E., Lacy, G.H., Sechler, A., Agarkova, I., Stromberg, P.E., Stromberg, V.K., and Vidaver, A.K. "Reclassification of Xanthomonas campestris pv. citri (ex Hasse 1915) Dye 1978 forms A, B/C/D, and E as X. smithii subsp. citri (ex Hasse) sp. nov. nom. rev. comb. nov., X. fuscans subsp. aurantifolii (ex Gabriel 1989) sp. nov. nom. rev. comb. nov., and X. alfalfae subsp. citrumelo (ex Riker and Jones) Gabriel et al., 1989 sp. nov. nom. rev. comb. nov.; X. campestris pv. malvacearum (ex smith 1901) Dye 1978 as X. smithii subsp. smithii nov. comb. nov. nom. nov.; X. campestris pv. alfalfae (ex Riker and Jones, 1935) dye 1978 as X. alfalfae subsp. alfalfae (ex Riker et al., 1935) sp. nov. nom. rev.; and "var. fuscans" of X. campestris pv. phaseoli (ex Smith, 1987) Dye 1978 as X. fuscans subsp. fuscans sp. nov." Syst. Appl. Microbiol. (2005) 28:494-518. (Erratum: Syst. Appl. Microbiol. (2006) 29:690-695.)
Schaad NW et al. (2006)
Schaad, N.W., Postnikova, E., Lacy, G., Sechler, A., Agarkova, I., Stromberg, P.E., Stromberg, V.K., and Vidaver, A.K. "Emended classification of xanthomonad pathogens on citrus." Syst. Appl. Microbiol. (2006) 29:690-695. [No abstract available.] (Note: Erratum to Schaad et al. 2005.)
VALIDATION LIST No. 115 (2007) (Xanthomonas citri subsp. citri)
Int. J. Syst. Evol. Microbiol. (2007) 57:893-897.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Xanthomonas citri type strain (BD-ID 170009) meta-databases BacDive
Xanthomonas citri LH201 organism-specific BioCyc
Xanthomonas citri LJ207-7 organism-specific BioCyc
Xanthomonas citri Xcc49 organism-specific BioCyc
Xanthomonas citri LL074-4 organism-specific BioCyc
Xanthomonas citri LH201 organism-specific BioCyc
Xanthomonas citri LH276 organism-specific BioCyc
Xanthomonas citri LH201 organism-specific BioCyc
Xanthomonas citri LJ207-7 organism-specific BioCyc
Xanthomonas citri LH276 organism-specific BioCyc
Xanthomonas citri Xcc49 organism-specific BioCyc
Xanthomonas citri LL074-4 organism-specific BioCyc
Xanthomonas citri LH276 organism-specific BioCyc
Xanthomonas citri Xcc49 organism-specific BioCyc
Xanthomonas citri LJ207-7 organism-specific BioCyc
Xanthomonas citri LL074-4 organism-specific BioCyc
GOLD: 96 Organisms organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
2663763268: Xanthomonas citri pv. citri LC80 organism-specific Integrated Microbial Genomes
2660238482: Xanthomonas citri pv. citri CFBP 2911 organism-specific Integrated Microbial Genomes
2671180461: Xanthomonas citri pv. citri LMG 9322 organism-specific Integrated Microbial Genomes
2663762811: Xanthomonas citri pv. citri AS270 organism-specific Integrated Microbial Genomes
2667527561: Xanthomonas citri pv. citri BL18 organism-specific Integrated Microbial Genomes
2667527487: Xanthomonas citri pv. citri MN12 organism-specific Integrated Microbial Genomes
2639763005: Xanthomonas citri pv. citri NCPPB 3607 organism-specific Integrated Microbial Genomes
2663763541: Xanthomonas citri pv. citri AW13 organism-specific Integrated Microbial Genomes
2651869828: Xanthomonas citri pv. citri NCPPB 3612 organism-specific Integrated Microbial Genomes
2687453371: Xanthomonas citri pv. citri jx-6 organism-specific Integrated Microbial Genomes
2663763248: Xanthomonas citri pv. citri FDC 217 organism-specific Integrated Microbial Genomes
2657245402: Xanthomonas citri pv. citri CFBP 2852 organism-specific Integrated Microbial Genomes
2648501762: Xanthomonas citri pv. citri JS581 organism-specific Integrated Microbial Genomes
2660237957: Xanthomonas citri pv. citri NCPPB 3562 organism-specific Integrated Microbial Genomes
2645727780: Xanthomonas citri pv. citri JK4-1 organism-specific Integrated Microbial Genomes
2645727958: Xanthomonas citri pv. citri LG97 organism-specific Integrated Microbial Genomes
2667527477: Xanthomonas citri pv. citri GD2 organism-specific Integrated Microbial Genomes
8007859388: Xanthomonas citri pv. citri NCPPB 3615 organism-specific Integrated Microbial Genomes
2639763087: Xanthomonas citri pv. citri LD7-1 organism-specific Integrated Microbial Genomes
2901006086: Xanthomonas citri citri 03-1638-1-1 organism-specific Integrated Microbial Genomes
8020139374: Xanthomonas citri pv. citri GD82 organism-specific Integrated Microbial Genomes
2907970794: Xanthomonas citri pv. citri TX160042 organism-specific Integrated Microbial Genomes
2728369373: Xanthomonas citri pv. citri LH276 organism-specific Integrated Microbial Genomes
2718218289: Xanthomonas citri pv. citri LJ207-7 organism-specific Integrated Microbial Genomes
2870168456: Xanthomonas citri pv. citri LM199 organism-specific Integrated Microbial Genomes
2870173549: Xanthomonas citri pv. citri LM180 organism-specific Integrated Microbial Genomes
2877475016: Xanthomonas citri citri Xcc29-1 organism-specific Integrated Microbial Genomes
2860503067: Xanthomonas citri pv. citri TX160149 organism-specific Integrated Microbial Genomes
2684622591: Xanthomonas citri pv. citri ASX_E_PRJEB7160 organism-specific Integrated Microbial Genomes
2860528616: Xanthomonas citri citri Xcc49 organism-specific Integrated Microbial Genomes
2877484511: Xanthomonas citri pv. citri TX160197 organism-specific Integrated Microbial Genomes
2718218218: Xanthomonas citri pv. citri LH201 organism-specific Integrated Microbial Genomes
2721755551: Xanthomonas citri pv. citri LL074-4 organism-specific Integrated Microbial Genomes
2651869827: Xanthomonas citri pv. citri LB302 organism-specific Integrated Microbial Genomes
2639762955: Xanthomonas citri pv. citri JS582 organism-specific Integrated Microbial Genomes
2660238675: Xanthomonas citri pv. citri MF20 organism-specific Integrated Microbial Genomes
2639763056: Xanthomonas citri pv. citri LG102 organism-specific Integrated Microbial Genomes
2660238155: Xanthomonas citri pv. citri NCPPB 3615 organism-specific Integrated Microbial Genomes
2639762815: Xanthomonas citri pv. citri JK143-11 organism-specific Integrated Microbial Genomes
2660238325: Xanthomonas citri pv. citri NT17 organism-specific Integrated Microbial Genomes
2651869789: Xanthomonas citri pv. citri LB100-1 organism-specific Integrated Microbial Genomes
2663763137: Xanthomonas citri pv. citri JF90-2 organism-specific Integrated Microbial Genomes
2671181102: Xanthomonas citri pv. citri JF90-8 organism-specific Integrated Microbial Genomes
2651869745: Xanthomonas citri pv. citri LMG 9322 organism-specific Integrated Microbial Genomes
2667527467: Xanthomonas citri pv. citri FB19 organism-specific Integrated Microbial Genomes
2660238693: Xanthomonas citri pv. citri AS8 organism-specific Integrated Microbial Genomes
2667528095: Xanthomonas citri pv. citri FDC 1083 organism-specific Integrated Microbial Genomes
2667527520: Xanthomonas citri pv. citri AW14 organism-specific Integrated Microbial Genomes
2651869659: Xanthomonas citri pv. citri JJ10-1 organism-specific Integrated Microbial Genomes
2648501883: Xanthomonas citri pv. citri NCPPB 3610 organism-specific Integrated Microbial Genomes
2663763094: Xanthomonas citri pv. citri AW16 organism-specific Integrated Microbial Genomes
2657245473: Xanthomonas citri pv. citri GD3 organism-specific Integrated Microbial Genomes
2648501333: Xanthomonas citri pv. citri LG117 organism-specific Integrated Microbial Genomes
2667527546: Xanthomonas citri pv. citri JK2-10 organism-specific Integrated Microbial Genomes
2663763325: Xanthomonas citri pv. citri AS9 organism-specific Integrated Microbial Genomes
2667527872: Xanthomonas citri pv. citri JS584 organism-specific Integrated Microbial Genomes
2663763015: Xanthomonas citri pv. citri JX5 organism-specific Integrated Microbial Genomes
2667527519: Xanthomonas citri pv. citri MN11 organism-specific Integrated Microbial Genomes
2648501838: Xanthomonas citri pv. citri LG115 organism-specific Integrated Microbial Genomes
2648501220: Xanthomonas citri pv. citri LE116-1 organism-specific Integrated Microbial Genomes
2645728040: Xanthomonas citri pv. citri LE3-1 organism-specific Integrated Microbial Genomes
2648501314: Xanthomonas citri pv. citri LH37-1 organism-specific Integrated Microbial Genomes
2667527521: Xanthomonas citri pv. citri MN10 organism-specific Integrated Microbial Genomes
2651869829: Xanthomonas citri pv. citri JK48 organism-specific Integrated Microbial Genomes
2667527505: Xanthomonas citri pv. citri JX4 organism-specific Integrated Microbial Genomes
2645727595: Xanthomonas citri pv. citri LG98 organism-specific Integrated Microbial Genomes
2660238609: Xanthomonas citri pv. citri C40 organism-specific Integrated Microbial Genomes
2667527913: Xanthomonas citri pv. citri JJ238-24 organism-specific Integrated Microbial Genomes
2657244951: Xanthomonas citri pv. citri AW15 organism-specific Integrated Microbial Genomes
2657244990: Xanthomonas citri pv. citri JW160-1 organism-specific Integrated Microbial Genomes
2639763073: Xanthomonas citri pv. citri JM35-2 organism-specific Integrated Microbial Genomes
2660238439: Xanthomonas citri pv. citri UI7 organism-specific Integrated Microbial Genomes
2667527544: Xanthomonas citri pv. citri 5208 organism-specific Integrated Microbial Genomes
2663763354: Xanthomonas citri pv. citri LD71a organism-specific Integrated Microbial Genomes
Notes:
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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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