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Taxonomy browser (Dickeya parazeae Ech586)

Dickeya parazeae Ech586

Taxonomy ID: 590409 (for references in articles please use NCBI:txid590409)
current name
Dickeya parazeae Ech586
Dickeya dadantii Ech586
Dickeya zeae Ech586
NCBI BLAST name: enterobacteria
Rank: strain
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( abbreviated )
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Pectobacteriaceae; Dickeya; Dickeya parazeae
   Entrez records   
Database name Direct links
Nucleotide 13
Protein 5,289
Genome 1
Popset 7
Gene 8,670
Identical Protein Groups 4,493
BioProject 2
BioSample 3
Assembly 1
Taxonomy 1

Comments and References:

genome sequence
Determination of the DNA genome sequence of this strain has been or is being determined either in whole or in part.
Hugouvieux-Cotte-Pattat N &Van Gijsegem F et al. (2021), doi:10.1099/ijsem.0.005059
Hugouvieux-Cotte-Pattat N, Van Gijsegem F. "Diversity within the Dickeya zeae complex, identification of Dickeya zeae and Dickeya oryzae members, proposal of the novel species Dickeya parazeae sp. nov." Int. J. Syst. Evol. Microbiol. (2021) 71(11):005059.
Marrero G et al. (2013)
Marrero, G., Schneider, K.L., Jenkins, D.M., and Alvarez, A.M. "Phylogeny and classification of Dickeya based on multilocus sequence analysis." Int. J. Syst. Evol. Microbiol. (2013) 63:3524-3539.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
2 records from this provider organism-specific BioCyc
GOLD: Go0004267 organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
646311920: Dickeya parazeae Ech586 organism-specific Integrated Microbial Genomes
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
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Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.

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