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Taxonomy browser (Salmonella)

Salmonella

Taxonomy ID: 590 (for references in articles please use NCBI:txid590)
current name
Salmonella Lignieres 1900
NCBI BLAST name: enterobacteria
Rank: genus
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae
   Entrez records   
Database name Subtree links Direct links
Nucleotide 2,864,659 415
Protein 44,481,336 21,857
Structure 1,160 -
Genome 3 1
Popset 490 187
Conserved Domains 119 -
GEO Datasets 4,844 20
PubMed Central 83,060 83,041
Gene 223,419 -
SRA Experiments 339,740 100
Protein Clusters 9,102 905
Identical Protein Groups 7,178,555 21,850
Bio Project 3,951 27
Bio Sample 351,011 109
Bio Systems 16,149 -
Assembly 273,971 -
Probe 1,440 359
PubChem BioAssay 4,836 139
Taxonomy 3,951 1

Comments and References:

Salmonella (LPSN link)
Salmonella nomenclature (LPSN link)
Salmonella nomenclature (Lindquist link)
Christensen H et al. (1998)
Christensen, H., Nordentoft, S., and Olsen, J.E. "Phylogenetic relationships of Salmonella based on rRNA sequences." Int. J. Syst. Bacteriol. (1998) 48:605-610.
Eiguer t & Caffer MI (1988)
Eiguer, T., and Caffer, M.I. "Salmonella taxonomy." Rev. Argent. Microbiol. (1988) 20:151-154.
Euzeby JP (1999)
Euzeby, J.P. "Revised Salmonella nomenclature: designation of Salmonella enterica (ex Kauffmann and Edwards 1952) Le Minor and Popoff 1987 sp. nov., nom. rev. as the neotype species of the genus Salmonella Lignieres 1900 (approved lists 1980), rejection of the name Salmonella choleraesuis (Smith 1894) Weldin 1927 (approved lists 1980), and conservation of the name Salmonella typhi (Schroeter 1886) Warren and Scott 1930 (approved lists 1980). Request for an opinion." Int. J. Syst. Bacteriol. (1999) 49:927-930.
Le Minor L & Popoff MY (1987)
Le Minor, L., and Popoff, M.Y. "Request for an Opinion. Designation of Salmonella enterica sp. nov., nom. rev., as the type and only species of the genus Salmonella." Int. J. Syst. Bacteriol. (1987) 37:465-468. [No PubMed record available.]
Lignieres J (1900)
Lignieres, J. "Maladies du porc." Bull. Soc. Cent. Med. Veterin. (1900) 18:389-431. [No PubMed record available.]
JUDICIAL COMMISSION (1991)
JUDICIAL COMMISSION: "Minutes of the Meetings, 14 September 1990, Osaka, Japan. (Minutes 17 (i) and 18 (iii))." Int. J. Syst. Bacteriol. (1991) 41:185-187. (Note: the Judicial Commission confirms that "Salmonella enterica" has no standing in the nomenclature.) [No PubMed record available.]
JUDICIAL COMMISSION (1994)
JUDICIAL COMMISSION: "Minutes of the Meetings, 2 and 6 July 1994, Prague, Czech Republic. (Minute 7)." Int. J. Syst. Bacteriol. (1995) 45:195-196. (Note: the proposals of Le Minor & Popoff (1987) were rejected.) [No PubMed record available.]
JUDICIAL OPINION 80 (2005)
Judicial Commision of the International Committee on Systematics of Prokaryotes: "The type species of the genus Salmonella Lignieres 1900 is Salmonella enterica (ex Kauffmann and Edwards 1952) Le Minor and Popoff 1987, with the type strain LT2T, and conservation of the epithet enterica in Salmonella enterica over all earlier epithets that may be applied to this species. Opinion 80 ." Int. J. Syst. Evol. Microbiol. (2005) 55:519-520.
Porwollik S et al. (2002)
Porwollik, S., Mei-Yi Wong, R., and McClelland, M. "Evolutionary genomics of Salmonella: Gene acquisitions revealed by microarray analysis." Proc. Natl. Acad. Sci. USA (2002) 99:8956-8961.
Skerman VBD et al. (1980)
Skerman, V.B.D., McGowan, V., and Sneath, P.H.A. (editors). "Approved lists of bacterial names." Int. J. Syst. Bacteriol. (1980) 30:225-420. [No PubMed record available.]
Tindall BJ et al. (2005)
Tindall, B.J., Grimont, P.A.D., Garrity, G.M., and Euzeby, J.P. "Nomenclature and taxonomy of the genus Salmonella." Int. J. Syst. Evol. Microbiol. (2005) 55:521-524.
Wayne LG et al. (1994)
Wayne, L.G. "Actions of the Judicial Commission of the International Committee on Systematic Bacteriology on requests for opinions published between January 1985 and July 1993." Int. J. Syst. Bacteriol. (1994) 44:177-178. [No PubMed record available.]
Yabuuchi E & Ezaki T (2000)
Yabuuchi, E., and Ezaki, T. "Arguments against the replacement of type species of the genus Salmonella from Salmonella choleraesuis to 'Salmonella enterica' and the creation of the term 'neotype species', and for conservation of Salmonella choleraesuis."Int. J. Syst. Evol. Microbiol. (2000) 50:1693-1694.

Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.


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