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Entrez PubMed Nucleotide Protein Genome Structure PMC Taxonomy BioCollections
   
   Entrez records   
Database name Direct links Subtree links Links from type
BioProject 15 515 -
BioSample 201 34,227 -
Conserved Domains 4 11 -
GEO DataSets 2 31 -
Gene - 37,903 -
Identical Protein Groups 3 23,097,138 -
Nucleotide 6 767,249 2,263
PMC 9,714 10,818 -
Protein 3 2,199,650 -
SRA 108 2,396 -
Structure - 65 -
Taxonomy 1,455 1,455 -

Acidobacteriota

Taxonomy ID: 57723 (for references in articles please use ncbitaxon:57723)
current name
Acidobacteriota corrig.  Thrash and Coates 2021 in [Oren A & Garrity GM (2021)]
homotypic synonym:
"Acidobacteria"  Thrash and Coates 2012
equivalent:
Acidobacteria
NCBI BLAST name: bacteria
Rank: phylum
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
heterotypic synonym Acidobacterium group
in-part Fibrobacteres/Acidobacteria group
in-part Fibrobacter/Acidobacteria group
Lineage(full)
cellular organisms; Bacteria; Pseudomonadati

Comments and References:
Oren A & Garrity GM (2021) , Pubmed: abstract
Oren, A., and Garrity, G.M. "Valid publication of the names of forty-two phyla of prokaryotes." Int. J. Syst. Evol. Microbiol. (2021) 71(10):005056.
Whitman WB et al. (2018) , Pubmed: abstract
Whitman, W.B., Oren, A., Chuvochina, M., da Costa, M.S., Garrity, G.M., Rainey, F.A., Rossello-Mora, R., Schink, B., Sutcliffe, I., Trujillo, M.E., and Ventura, S. "Proposal of the suffix -ota to denote phyla. Addendum to 'Proposal to include the rank of phylum in the International Code of Nomenclature of Prokaryotes'." Int. J. Syst. Evol. Microbiol. (2018) 68(3):967-969.
Oren A et al. (2015) , Pubmed: abstract
Oren, A., da Costa, M.S., Garrity, G.M., Rainey, F.A., Rosselló-Móra, R., Schink, B., Sutcliffe, I., Trujillo, M.E., and Whitman, W.B. "Proposal to include the rank of phylum in the International Code of Nomenclature of Prokaryotes." Int. J. Syst. Evol. Microbiol. (2015) 65(11):4284-4287.
Thrash JC & Coates JD (2011)
Thrash, J.C., and Coates, J.D. "Phylum XVII. Acidobacteria phyl. nov." In: Bergey's Manual of Systematic Bacteriology, 2nd ed., vol. 4 (The Bacteroidetes, Spirochaetes, Tenericutes (Mollicutes), Acidobacteria, Fibrobacteres, Fusobacteria, Dictyglomi, Gemmatimonadetes, Lentisphaerae, Verrumicrobia, Chlamydiae, and Planctomycetes) (N.R. Krieg, J.T. Staley, D.R. Brown, B.P. Hedlund, B.J. Paster, N.L. Ward, W. Ludwig, and W.B. Whitman, eds.), Springer-Verlag, New York (2011). pp. 725-727. [No PubMed record available.]
VALIDATION LIST No. 143 (2012)
Validation List No. 143: "List of new names and new combinations previously effectively, but not validly, published." Int. J. Syst. Evol. Microbiol. (2012) 62:1-4. [Erratum: Int. J. Syst. Evol. Microbiol. (2012) 62:1016.]

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Acidobacteria taxonomy/phylogenetic Encyclopedia of life
2835703135: Uncultured Acidobacteria Aci5 m_rhze4 organism-specific Integrated Microbial Genomes
2820951912: Unclassified Acidobacteria Emb289P4bin26 organism-specific Integrated Microbial Genomes
2835675978: Uncultured Acidobacteria Aci2 r_rhhh31 organism-specific Integrated Microbial Genomes
2835671263: Uncultured Acidobacteria Aci1 r_rhze13 organism-specific Integrated Microbial Genomes
2835685566: Uncultured Acidobacteria Aci2 m_rhlh7 organism-specific Integrated Microbial Genomes
2820950349: Unclassified Acidobacteria Lab288P3bin89 organism-specific Integrated Microbial Genomes
2808606349: unclassified Acidobacteria BinDmb252 organism-specific Integrated Microbial Genomes
2835699436: Uncultured Acidobacteria Aci4 m_rhhl17 organism-specific Integrated Microbial Genomes
2835677690: Uncultured Acidobacteria Aci2 r_rhhh32 organism-specific Integrated Microbial Genomes
2835690707: Uncultured Acidobacteria Aci2 m_rhll19 organism-specific Integrated Microbial Genomes
2835681218: Uncultured Acidobacteria Aci3 r_rhhh9 organism-specific Integrated Microbial Genomes
2806310633: Acidobacteria bacterium CoA8_BinC33 organism-specific Integrated Microbial Genomes
2835678469: Uncultured Acidobacteria Aci2 r_rhhl26 organism-specific Integrated Microbial Genomes
2835667313: Uncultured Acidobacteria Aci1 r_rhlh16 organism-specific Integrated Microbial Genomes
2835682289: Uncultured Acidobacteria Aci1 m_rhll5 organism-specific Integrated Microbial Genomes
2835702036: Uncultured Acidobacteria Aci4 m_rhze13 organism-specific Integrated Microbial Genomes
2835675262: Uncultured Acidobacteria Aci2 r_rhhh30 organism-specific Integrated Microbial Genomes
2835693917: Uncultured Acidobacteria Aci3 m_rhll9 organism-specific Integrated Microbial Genomes
2820946191: Unclassified Acidobacteria Nt197P3bin31 organism-specific Integrated Microbial Genomes
2835689504: Uncultured Acidobacteria Aci2 m_rhll14 organism-specific Integrated Microbial Genomes
2806310632: Acidobacteria bacterium CoA2_BinC42 organism-specific Integrated Microbial Genomes
2684623258: DS-18 bacterium JGI 004 (contamination screened) organism-specific Integrated Microbial Genomes
2582580672: Composite genome from Trout Bog Hypolimnion pan-assembly TBhypo.metabat.3273 organism-specific Integrated Microbial Genomes
2684623259: DS-18 bacterium JGI 004 (unscreened) organism-specific Integrated Microbial Genomes
2623620412: Acidobacteria sp. genome_bin_23 organism-specific Integrated Microbial Genomes
2582580687: Composite genome from Trout Bog Hypolimnion pan-assembly TBhypo.metabat.4565 organism-specific Integrated Microbial Genomes
2582580662: Composite genome from Trout Bog Hypolimnion pan-assembly TBhypo.metabat.254 organism-specific Integrated Microbial Genomes
2684623255: Sva0725 bacterium JGI 005 (unscreened) organism-specific Integrated Microbial Genomes
2619618849: Acidobacteria sp. genome_bin_3 organism-specific Integrated Microbial Genomes
2623620430: Acidobacteria sp. genome_bin_45 organism-specific Integrated Microbial Genomes
2623620399: Acidobacteria sp. genome_bin_1 organism-specific Integrated Microbial Genomes
2820947865: Unclassified Acidobacteria Nt197P3bin133 organism-specific Integrated Microbial Genomes
2835691522: Uncultured Acidobacteria Aci3 m_rhlh14 organism-specific Integrated Microbial Genomes
2835664151: Uncultured Acidobacteria Aci3 r_rhhl20 organism-specific Integrated Microbial Genomes
2835700884: Uncultured Acidobacteria Aci4 m_rhze12 organism-specific Integrated Microbial Genomes
2835659725: Uncultured Acidobacteria Aci1 r_rhhh15 organism-specific Integrated Microbial Genomes
2835695647: Uncultured Acidobacteria Aci4 m_rhhh6 organism-specific Integrated Microbial Genomes
2835664876: Uncultured Acidobacteria Aci1 r_rhhl22 organism-specific Integrated Microbial Genomes
Acidobacteria taxonomy/phylogenetic Lifemap
Acidobacteriota | SeqCode Registry taxonomy/phylogenetic SeqCode Registry
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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