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Entrez PubMed Nucleotide Protein Genome Structure PMC Taxonomy BioCollections
   
   Entrez records   
Database name Direct links Subtree links Links from type
BioProject 10 48 -
BioSample 111 453 -
Gene 4,693 13,935 -
Identical Protein Groups 64,956 84,688 -
Nucleotide 1,770 58,503 3,896
PMC 58 167 -
Protein 80,162 282,278 -
SRA 112 413 -
Structure - 2 -
Taxonomy 11 11 -

Xanthomonas hortorum

Taxonomy ID: 56454 (for references in articles please use NCBI:txid56454)
current name
Xanthomonas hortorum  Vauterin et al. 1995 in [Vauterin L et al. (1995)]
type strain of Xanthomonas hortorum: ICMP : 453 , BCCM/LMG : 733 , NCPPB : 939 , WHRI : 7744
not verified as type of Xanthomonas hortorum: CFBP : 4188
homotypic synonym:
Xanthomonas hortorum  Vauterin et al. 1995 emend. Morinière et al. 2020 , emended name  1) in [Morinière L et al. (2020)]
NCBI BLAST name: g-proteobacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage(full)
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Lysobacterales; Lysobacteraceae; Xanthomonas

Notes:

Comments and References:
Vauterin L et al. (1995)
Vauterin, L., Hoste, B., Kersters, K., and Swings, J. "Reclassification of Xanthomonas." Int. J. Syst. Bacteriol. (1995) 45(3):472-489.
Morinière L et al. (2020) , Pubmed: abstract
Morinière, L., Burlet, A., Rosenthal, E.R., Nesme, X., Portier, P., Bull, C.T., Lavire, C., Fischer-Le Saux, M., and Bertolla, F. "Clarifying the taxonomy of the causal agent of bacterial leaf spot of lettuce through a polyphasic approach reveals that Xanthomonas cynarae Trébaol et al. 2000 emend. Timilsina et al. 2019 is a later heterotypic synonym of Xanthomonas hortorum Vauterin et al. 1995." Syst. Appl. Microbiol. (2020) 43(4):126087.
Vauterin L et al. (1995)
Vauterin, L., Hoste, B., Kersters, K., and Swings, J. "Reclassification of Xanthomonas." Int. J. Syst. Bacteriol. (1995) 45(3):472-489. [No PubMed record available.]

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Xanthomonas hortorum type strain (BD-ID 17599) meta-databases BacDive
Xanthomonas hortorum type strain (BD-ID 17616) meta-databases BacDive
Xanthomonas hortorum B07-007 organism-specific BioCyc
Xanthomonas hortorum B07-007 organism-specific BioCyc
Xanthomonas hortorum B07-007 organism-specific BioCyc
Xanthomonas hortorum Vauterin et al. 1995 taxonomy/phylogenetic Encyclopedia of life
GOLD: 4 Organisms organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Xanthomonas hortorum culture/stock collections Global Catalogue of Microorganisms
2880457142: Xanthomonas hortorum pv. hederae CFBP4925 organism-specific Integrated Microbial Genomes
2806310724: Xanthomonas hortorum B07-007 organism-specific Integrated Microbial Genomes
Xanthomonas hortorum | SeqCode Registry taxonomy/phylogenetic SeqCode Registry
Xanthomonas hortorum type strain (SI-ID 5589) meta-databases StrainInfo, Leibniz Institute DSMZ
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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