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Taxonomy browser (Escherichia)


Taxonomy ID: 561 (for references in articles please use NCBI:txid561)
current name
Escherichia Castellani and Chalmers 1919
NCBI BLAST name: enterobacteria
Rank: genus
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae
   Entrez records   
Database name Subtree links Direct links
Nucleotide 13,331,643 29
Protein 77,990,913 111,071
Structure 12,522 3
Genome 7 1
Popset 6,018 1,124
Conserved Domains 59 9
GEO Datasets 26,104 -
PubMed Central 475,213 475,060
Gene 477,902 -
SRA Experiments 431,840 852
GEO Profiles 313,301 -
Protein Clusters 18,393 6,992
Identical Protein Groups 19,310,777 110,910
BioProject 13,433 50
BioSample 503,501 775
Assembly 285,416 -
Genetic Testing Registry 3 -
PubChem BioAssay 23,862 57
Taxonomy 4,735 1

Comments and References:

Escherichia (LPSN link)
Castellani A & Chalmers AJ (1919)
Castellani, A., and Chalmers, A.J. Manual of Tropical Medicine, 3rd ed. (1919). Williams Wood and Co., New York. [No PubMed abstract available.]
Lapage SP et al. (1992)
Lapage, S.P., Sneath, P.H.A., Lessel, E.F., Skerman, V.B.D., Seeliger, H.P.R., and Clark, W.A. "International code of nomenclature of bacteria (1990 revision)." American Society for Microbiology, Washington, D.C. (1992) p. 101. [No PubMed record available.]
Skerman VBD et al. (1980)
Skerman, V.B.D., McGowan, V., and Sneath, P.H.A. (editors). "Approved lists of bacterial names." Int. J. Syst. Bacteriol. (1980) 30:225-420. [No PubMed record available.]
Walk ST et al. (2009)
Walk, S.T., Alm, E.W., Gordon, D.M., Ram, J.L., Toranzos, G.A., Tiedje, J.M., and Whittam, T.S. "Cryptic lineages of the Escherichia genus." Appl. Environ. Microbiol. (2009) 75:6534-6544.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Escherichia taxonomy/phylogenetic Encyclopedia of life
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
10 records from this provider organism-specific Integrated Microbial Genomes
Escherichia taxonomy/phylogenetic Integrated Taxonomic Information System
Escherichia taxonomy/phylogenetic Lifemap
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Escherichia Castellani & Chalmers, 1919 taxonomy/phylogenetic Ocean Biogeographic Information System
Escherichia Castellani & Chalmers, 1919 taxonomy/phylogenetic World Register of Marine Species
Wikipedia taxonomy/phylogenetic iPhylo
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.

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