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Taxonomy browser (Trichoderma reesei)

Trichoderma reesei

Taxonomy ID: 51453 (for references in articles please use NCBI:txid51453)
Scientific name: Trichoderma reesei E.G. Simmons, 1977 E.G. Simmons 1977
type material of Trichoderma reesei E.G. Simmons, 1977: CBS:383.78
type material of Trichoderma reesei E.G. Simmons, 1977: CCM:F:560
type material of Trichoderma reesei E.G. Simmons, 1977: DSM:768
type material of Trichoderma reesei E.G. Simmons, 1977: IMI:192654
type material of Trichoderma reesei E.G. Simmons, 1977: QM:6a
type material of Trichoderma reesei E.G. Simmons, 1977: VKM:F:2047
type material of Trichoderma reesei E.G. Simmons, 1977: VTT:D:74083
culture from type material of Trichoderma reesei E.G. Simmons, 1977: ATCC:13631
culture from type material of Trichoderma reesei E.G. Simmons, 1977: DAOM:167654
NCBI BLAST® name: ascomycetes
Rank: species
Genetic code: Translation table 1 (Standard)
Mitochondrial genetic code: Translation table 4 (Mold Mitochondrial; Protozoan Mitochondrial; Coelenterate Mitochondrial; Mycoplasma; Spiroplasma)
Other names:
heterotypic genbank synonym: Hypocrea jecorina
Lineage( full )
cellular organisms; Eukaryota; Opisthokonta; Fungi; Dikarya; Ascomycota; saccharomyceta; Pezizomycotina; leotiomyceta; sordariomyceta; Sordariomycetes; Hypocreomycetidae; Hypocreales; Hypocreaceae; Trichoderma
   Entrez records   
Database name Subtree links Direct links
Nucleotide 65,629 56,093
Protein 28,842 658
Structure 142 114
Genome 1 1
Popset 87 87
GEO Datasets 499 484
PubMed Central 2,431 2,431
Gene 9,166 45
SRA Experiments 387 343
Identical Protein Groups 13,810 357
Bio Project 180 166
Bio Sample 463 413
Bio Systems 235 -
Assembly 6 2
Probe 17 17
PubChem BioAssay 4 4
Taxonomy 4 1

Comments and References:

Hypocrea jecorina
Kuhls K, Lieckfeldt E, Samuels GJ, Kovacs, Meyer W, Petrini O, Gams W, Borner T. and Kubicek CP. 1996. Molecular evidence that the asexual industrial fungus Trichoderma reesei is a clonal derivative of the ascomycete Hypocrea jecorina. Proc. Natl. Acad. Sci. U.S.A. 93 (15): 7755-7760.


Genome Information

Go to NCBI genomic BLAST® page for Trichoderma reesei
   Trace records (raw single-pass reads of DNA sequence)   
Sequencing Center Name
Record counts per type
WGS ALL
JGI - Joint Genome Institute, U.S. Department of Energy
506,338 506,338
Totals per type
506,338 506,338

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Hypocrea jecorina Berk. & Broome 1873 taxonomy/phylogenetic Encyclopedia of life
19 records from this provider organism-specific Genomes On Line Database
Hypocrea jecorina culture/stock collections Global Catalogue of Microorganisms
2 records from this provider taxonomy/phylogenetic Index Fungorum
2761201867: Trichoderma reesei RUT C-30 organism-specific Integrated Microbial Genomes
2 records from this provider taxonomy/phylogenetic MycoBank
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
2 records from this provider taxonomy/phylogenetic Systematic Mycology and Microbiology Laboratory, Fungal Databases
Trichoderma reesei taxonomy/phylogenetic TreeBase
2 records from this provider organism-specific WebScipio - eukaryotic gene identification
3 records from this provider organism-specific diArk - a resource for eukaryotic genome research
Wikipedia taxonomy/phylogenetic iPhylo
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.


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