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Taxonomy browser (Bipolaris maydis)

Bipolaris maydis

Taxonomy ID: 5016 (for references in articles please use NCBI:txid5016)
current name
Bipolaris maydis (Y. Nisik. & C. Miyake) Shoemaker, 1959
basionym:
Helminthosporium maydis Y. Nisik. & C. Miyake, 1926
neotype of Helminthosporium maydis: ATCC:48332
culture from neotype of Helminthosporium maydis: CBS:137271
culture from paratype of Helminthosporium maydis: CBS:136.29
homotypic synonym:
Drechslera maydis
Heliminthosporium maydis
Genbank common name: southern corn leaf blight pathogen
NCBI BLAST name: ascomycete fungi
Rank: species
Genetic code: Translation table 1 (Standard)
Mitochondrial genetic code: Translation table 4 (Mold Mitochondrial; Protozoan Mitochondrial; Coelenterate Mitochondrial; Mycoplasma; Spiroplasma)
Other names:
heterotypic synonym
Cochliobolus heterostrophus
holotype of Cochliobolus heterostrophus: BPI:626700
heterotypic synonym
Ophiobolus heterostrophus
Lineage( full )
cellular organisms; Eukaryota; Opisthokonta; Fungi; Dikarya; Ascomycota; saccharomyceta; Pezizomycotina; leotiomyceta; dothideomyceta; Dothideomycetes; Pleosporomycetidae; Pleosporales; Pleosporineae; Pleosporaceae; Bipolaris
   Entrez records   
Database name Subtree links Direct links Links from type
Nucleotide 44,010 30,727 16
Protein 121,024 82,301 -
Genome 1 1 -
Popset 68 68 -
GEO Datasets 34 34 -
PubMed Central 1,233 1,233 -
Gene 12,811 1 -
SRA Experiments 96 85 -
Identical Protein Groups 34,116 30,785 -
BioProject 26 20 -
BioSample 72 65 -
Assembly 11 9 -
PubChem BioAssay 10 10 -
Taxonomy 6 1 -

Comments and References:

Manamgoda DS et al. (2012a), doi:10.1007/s13225-012-0189-2
Manamgoda D.S, Cai L., McKenzie E.H.C., Crous P.W., Madrid H., Chukeatirote E., Shivas R.G., Tan T.P. and Hyde K.D. 2012. A phylogenetic and taxonomic re-evaluation of the Bipolaris - Cochliobolus - Curvularia complex. Fungal Diversity (2012) 56:131-144.

Genome Information

Go to NCBI genomic BLAST page for Bipolaris maydis

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Cochliobolus heterostrophus (Drechsler) Drechsler 1934 taxonomy/phylogenetic Encyclopedia of life
4 records from this provider organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Cochliobolus heterostrophus culture/stock collections Global Catalogue of Microorganisms
3 records from this provider taxonomy/phylogenetic Index Fungorum
2761201715: Bipolaris maydis ATCC 48331 organism-specific Integrated Microbial Genomes
3 records from this provider taxonomy/phylogenetic MycoBank
3 records from this provider taxonomy/phylogenetic Systematic Mycology and Microbiology Laboratory, Fungal Databases
Cochliobolus heterostrophus taxonomy/phylogenetic TreeBase
2 records from this provider organism-specific WebScipio - eukaryotic gene identification
2 records from this provider organism-specific diArk - a resource for eukaryotic genome research
Wikipedia taxonomy/phylogenetic iPhylo
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

Organism modifiers

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strain
1 [4] 1 CO [1] 1 NE [1] 1 NO [1]
11 RJ [1] 11RJ [1 1 1] 134.39 [1] 1CO [1 1 1]
1NE [1 1 1] 1NO [1 1 1] 2 ES [1] 20236B3 [2]
2ES [1 1 1] 3 NO [1] 3NO [1 1 1] 4 RJ [1]
4RJ [1 1 1] 5 RJ [1] 5B0212 [1 1] 5RJ [1 1 1]
6 ES [1] 6 RJ [1] 6028 [1] 6ES [1 1 1]
6RJ [1 1 1] ACCC 36265 [4 2] ACCC 38152 [1 1] ACCC38152 [1 1 1]
ACCC38948 [1 1] ACCC38949 [1 1] ACCC38950 [1 1] ACCC38951 [1 1]
ACCC38952 [1 1] ACCC38953 [1 1] ACCC38954 [1 1] ACCC38955 [1 1]
ACCC38956 [1 1] AR5182 [3 3 2] AR5183 [4 4 2] ARML-3.1 [1]
ATCC 64121 [2] B24 [2 2] B25 [2 2] B26 [2 2]
B30.A3.R.1 [1 1] B42 [2 2] BD0501070 [1 1] BHBhr [1 1]
BM [1 2] BM-1-MG-1 [1 1 1] BM1 [1 1 28 11026] BM32 [1]
BmP1 [1] C1; FSU2574 [2 2 1] C2 [2 3] C2 (ATCC 48329) [1 2]
C3 [8 3 15] C3; FSU2575 [3 3 3] C4 [1 12 139 3 11413 14] C4; ATCC 48331 [53 52]
C5 [3 7 28857 5 25143 15] C5(Tox(-)Mat1-1) [1 1] C5; FSU2576 [2 2 2] CBS 127225 [2 2]
CBS 130.26 [8 1] CBS 134.39 [3 1 1] CBS 136.24 [1 2] CBS 136.26 [1 2 1]
CBS 136.29 [15 4 3] CBS 307.64 [6 2 1] CBS 573.73 [4 1 1] CBS 574.73 [1 1]
CN021H8 [1] CPC 28823 [3 3 2] Chl-1.1 [1] DLDel [1 1]
E4504 [1 1] E9001 [1 1] E9002 [1 1] E9003 [1 1]
FSU2695 [2 2 2] FX0501077 [1 1] GZ0501025 [1 1] HAW225 [1 1 112 11726]
HB126 [4 4] HB13-A [1] HBX3 [2 2] HITO7711 [11 13]
HL0501051 [1 1] HPBaj [1 1] HPKng [1 1] HRKrl [1 1]
Hm338 [2 3 98 12842 1] ICMP 23218 [1] ICMP 23224 [1] JZB3170002 [1]
JZB3170003 [1] KET7 [1 1 1] Leonard HM80 [2 2 1] M0260 [3 2 2]
M0283 [3 2 2] M0423 [2 1 1] M0426 [2 1 1] M0475 [3 2 2]
M0493 [1 1 1] M0494 [1 1 1] M0495 [1 1 1] M0496 [1 1 1]
M0497 [1 1 1] M0806 [1] M1007 [1] MFLUCC17-1100 [1]
ML9001 [2 2 2] ML9030 [2 2 2] ML9032 [2 2 2] MLL 1-5 [2 1]
MM1 [1] N9001 [1 1] N9006 [1 1] N9013 [1 1]
N9017 [1 1] OS_30 [1] PJLud [1 1] PR1x412 [1 2 41 11792 4]
PR9b [1 1 114 11144] RJBsw [1 1] RJCtg [1 1] RJDpr [1 1]
RJKta [1 1] RJUdp [1 1] T40 [1 2] TH0501029 [1 1]
UAPnt [1 1] YL0601010 [1 1] Yoder C5 [1] Yoder C5 (141-1-2) [1 1 1]
Yoder HAW288 [2 2 1] Yoder HM388 [1 1 1] ZG10 [1] ZM358 [3 2 2]
desa2 [1]
cultivar
DHM 117 [1]
isolate
1-4-1 [5 5 4] 1-4-2 [5 5 4] 1-4-3 [5 5 4] 1-6-1 [5 5 4]
1-6-3 [5 5 4] 1-7-2 [5 5 4] 18WJ-2-1 [5 5 4] AFTOL-ID 54 [7 1 1]
AH202 [1] AH211 [1] B24 [3 1 1] B25 [3 1 1]
B26 [3 1] B42 [2 1] BM-1 [1] BM-2 [2 1]
BM01 [1] BM1 [1 5 2 3 2] BM10 [7 4 5] BM11 [7 4 5]
BM12 [6 3 4] BM13 [6 3 4] BM14 [5 3 5] BM15 [4 2 3]
BM16 [6 4 5] BM17 [6 4 5] BM18 [6 4 5] BM19 [6 4 5]
BM2 [5 3 4] BM20 [6 4 5] BM21 [6 4 5] BM22 [6 4 5]
BM23 [5 3 4] BM24 [7 4 6] BM25 [6 4 5] BM26 [4 4 3]
BM27 [4 4 3] BM28 [2 2 1] BM29 [3 3 2] BM3 [4 2 3]
BM30 [2 2 1] BM31 [2 2 1] BM32 [2 2 1] BM33 [3 3 2]
BM34 [2 2 1] BM35 [3 3 2] BM36 [3 3 2] BM4 [5 3 4]
BM5 [6 4 5] BM6 [5 3 4] BM7 [7 4 5] BM8 [6 4 5]
BM9 [6 4 5] Bm 01 [1] Bm 02 [1] Bm 03 [1]
Bm 04 [1] Bm 05 [1] Bm 06 [1] Bm 07 [1]
Bm 08 [1] Bm 09 [1] Bm 10 [1] Bm 11 [1]
Bm 12 [1] Bm 13 [1] Bm 14 [1] Bm 15 [1]
Bm06 [1] Bm07 [1] Bm08 [1] Bm09 [1]
Bm10_Delhi2 [1 1] Bm10_Delhi2_ITS [1] Bm11_Delhi3 [1 1] Bm11_Delhi3_ITS [1]
Bm12_Kangra [1 1] Bm12_Kangra_ITS [1] Bm13_Karnal [1 1] Bm13_Karnal_ITS [1]
Bm14_Kinnaur [1 1] Bm14_Kinnaur_ITS [1] Bm15_Kullu [1 1] Bm15_Kullu_ITS [1]
Bm16_Ludhiana [1 1] Bm16_Ludhiana_ITS [1] Bm17_Mandi [1 1] Bm17_Mandi_ITS [1]
Bm18_Mau [1 1] Bm18_Mau_ITS [1] Bm19_Motipur [1 1] Bm19_Motipur_ITS [1]
Bm1_Almora [1 1] Bm1_Almora_ITS [1] Bm20_Palampur [1 1] Bm20_Palampur_ITS [1]
Bm21_Pantnagar [1 1] Bm21_Pantnagar_ITS [1] Bm22_RakhDhiansar [1 1] Bm22_RakhDhiansar_ITS [1]
Bm23_Ranchi [1 1] Bm23_Ranchi_ITS [1] Bm24_Samastipur_ITS [1] Bm25_Solan [1 1]
Bm25_Solan_ITS [1] Bm2_Anand [1 1] Bm2_Anand_ITS [1] Bm3_Bangalore [1 1]
Bm3_Bangalore_ITS [1] Bm4_BariBrahmna [1 1] Bm4_BariBrahmna_ITS [1] Bm5_Bhubaneswar [1 1]
Bm5_Bhubaneswar_ITS [1] Bm6_Dharwad [1 1] Bm6_Dharwad_ITS [1] Bm7_Haldwani [1 1]
Bm7_Haldwani_ITS [1] Bm8_Hyderabad [1 1] Bm8_Hyderabad_ITS [1] Bm9_Delhi1 [1 1]
Bm9_Delhi1_ITS [1] BmBjUa1 [1 1 1] BmBsRj4 [1 1 1] BmCgRj4 [1 1 1]
BmDhBh3 [1 1 1] BmDnRj4 [1 1 1] BmKaUa1 [1 1 1] BmKrHr2 [1 1 1]
BmKtRj4 [1 1 1] BmLdPj2 [1 1 1] BmMyKa6 [1 1 1] BmPhRj4 [1 1 1]
BmPnD12 [1 1 1] BmPtUa1 [1 1 1] Bp1 [1] Bp10 [1]
Bp11 [1] Bp12 [1] Bp13 [1] Bp14 [1]
Bp15 [1] Bp2 [1] Bp3 [1] Bp4 [1]
Bp5 [1] Bp6 [1] Bp7 [1] Bp8 [1]
Bp9 [1] C4 [4 3 2] C5 [2 2] CAU.COA.PP.ET-13 [1]
CBS136.29 [1 1] CDCZ-1-2 [5 5 4] CDCZ-1-3 [5 5 4] CH001 [2 1]
CH002 [2 1] CH003 [2 1] CH004 [2 1] CH005 [2 1]
CH006 [2 1] CH007 [2 1] CH008 [2 1] CH009 [2 1]
CH010 [2 1] CU 1241 [1 1] CU 1383 [1 1] D-II [1]
DY-12-1-2 [5 5 4] DY-16-1-1 [5 5 4] DY-5-2 [5 5 4] DY-7-3 [5 5 4]
DY-9-4 [5 5 4] DYZJ-9-1 [5 5 4] Delhi [2] E10 [4 2 1]
E15 [4 1 1] E19 [4 1 1] E24 [4 1] E25 [4 1 1]
E26 [4 1] E27 [5 1 1] E3 [4 1 1] E30 [4 1]
E38 [4 1] E50 [4 1 1] E6 [1] E7 [5 2 1]
E90 [1] EG2M1-1 [1] Eg_57.ab1 [1] Eg_59.ab1 [1]
Eg_60.ab1 [1] Eg_73.ab1 [1] Eg_88.ab1 [1] F1 [4 4 1]
F11 [1 1 1] F12 [1 1 1] F13 [4 4 1] F15 [1 1 1]
F169 [1] F17 [3 3 1] F18 [3 3 1] F2 [4 4 1]
F20 [4 4 1] F21 [4 4 1] F22 [3 3 1] F23 [2 2 1]
F25 [3 3 1] F26 [3 3 1] F27 [3 3 1] F28 [3 3 1]
F29 [3 3 1] F3 [3 3] F31 [4 4 1] F32 [4 4 1]
F33 [3 3 1] F36 [2 2 1] F37 [4 4 1] F38 [4 4 1]
F39 [3 3 1] F4 [4 4 1] F42 [4 4 1] F46 [3 3 1]
F47 [4 4 1] F48 [4 4 1] F49 [4 4 1] F5 [4 4 1]
F50 [3 3 1] F51 [2 2 1] F52 [2 2] F53 [4 4 1]
F6 [4 4 1] F7 [4 4 1] FZ1509s [1 1] Hm338 [2 2]
Hm540 [2 2] IMI146543 [2 2] JO1503d [1 1] JO1601DT01 [1 1]
JO1601DT09 [1 1] JZB317002 [1 1] JZB317003 [1 1] L-3213/2012 [1]
L-3387/2012 [1] L-3612/2012 [1] LH1505b [1 1] LZ-2-1-1 [5 5 4]
LZ-3-1-2 [5 5 4] MFLUCC 17-1100 [1 1] MH1505a [1 1] MR1369-1 [3 2]
MR1486-2 [3 2] MS-1-1-2 [5 5 4] MS-15-2-2 [5 5 4] MS-19-1-3 [5 5 4]
MS-19-1-4 [5 5 4] MS-20-1-1 [5 5 4] MS-20-2-1 [5 5 4] MS-21-2-3 [5 5 4]
MS-4-1-3 [5 5 4] MS-4-1-4 [5 5 4] MS-5-1-2 [5 5 4] MSRS-1-2 [5 5 4]
MSRS-2-3 [5 5 4] MWIT1 [1] MyKa6 [1] NLF07 [1 1]
NLF28 [1 1] NLF61 [1 1] NRRL 5294 [1 1] Navsari NAU [1]
OTU_92 [1] PN1601 [1 1] PN1601DT01 [1 1] PN1601DT02 [1 1]
PN1606 [1 1] PQBM [1 1] PR1x412 [2 2] Q1-2-2 [5 5 4]
RWB 1035 [2 2 1] RWB 1158 [2 2 1] RWB 1212 [2 2 1] RWB 1670 [1 1]
SH01 [1] SM-1 [1] SM18 [1] SM38 [1]
T19 [1 1] T20 [1 1] T21 [1 1] T28 [1 1]
T7 [1 1] T8 [1 1] USJCC-0131 [3 2 2] ZFM5 [1]
ZN1518a [1 1] mcs1 [1 1]
nat-host
Zea mays L. [1] maize [4]
specimen-voucher
Bm [1 1] CBS 134.39 [2] CIRAD:ML9001 [1] CIRAD:ML9030 [1]
CIRAD:ML9032 [1] OSC 100067 [4 1 1] OSC 100067; CBS 134.39 [1] UENF:475 [2 1 1]
UENF:477 [2 1 1] UENF:479 [2 1 1] UENF:481 [2 1 1] UENF:492 [2 1 1]
UENF:496 [2 1 1] UENF:501 [2 1 1] UENF:502 [2 1 1] UENF:503 [2 1 1]
UENF:508 [2 1 1] VIC 31266 [1 1 1] VIC 42655 [1 1 1] VIC 42664 [1 1 1]
culture-collection
ATCC:64121 [2] CBS:127225 [2 2] CBS:130.26 [4 1] CBS:136.24 [1 2]
CBS:136.26 [1 2 1] CBS:136.29 [11 4 3] CBS:307.64 [6 2 1] CBS:573.73 [4 1 1]
CBS:574.73 [1 1] CPC:28823 [3 3 2] IHEM:05881 [1]

Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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