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Taxonomy browser (Bipolaris maydis)

Bipolaris maydis

Taxonomy ID: 5016 (for references in articles please use NCBI:txid5016)
Scientific name: Bipolaris maydis (Y. Nisik. & C. Miyake) Shoemaker, 1959
neotype of Bipolaris maydis: ATCC:48332
culture from paratype of Bipolaris maydis: CBS:136.29
culture from neotype of Bipolaris maydis: CBS:137271
homotypic synonym: Drechslera maydis
homotypic synonym: Heliminthosporium maydis
homotypic synonym: Helminthosporium maydis
Genbank common name: southern corn leaf blight pathogen
Inherited blast name: ascomycetes
Rank: species
Genetic code: Translation table 1 (Standard)
Mitochondrial genetic code: Translation table 4 (Mold Mitochondrial; Protozoan Mitochondrial; Coelenterate Mitochondrial; Mycoplasma; Spiroplasma)
Other names:
genbank synonym: Cochliobolus heterostrophus
  holotype of Cochliobolus heterostrophus: BPI:626700
synonym: Ophiobolus heterostrophus
Lineage( abbreviated )
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Dothideomycetes; Pleosporomycetidae; Pleosporales; Pleosporineae; Pleosporaceae; Bipolaris
   Entrez records   
Database name Subtree links Direct links
Nucleotide 14,326 1,014
Nucleotide EST 28,747 28,747
Protein 39,124 377
Genome 1 1
Popset 52 52
PubMed Central 634 634
Gene 12,811 1
SRA Experiments 15 4
Identical Protein Groups 15,064 211
Bio Project 9 3
Bio Sample 13 6
Assembly 2 -
PubChem BioAssay 6 6
Taxonomy 6 1

Comments and References:

Nota BeneManamgoda DS et al. (2012a)
Manamgoda D.S, Cai L., McKenzie E.H.C., Crous P.W., Madrid H., Chukeatirote E., Shivas R.G., Tan T.P. and Hyde K.D. 2012. A phylogenetic and taxonomic re-evaluation of the Bipolaris - Cochliobolus - Curvularia complex. Fungal Diversity (2012) 56:131-144.


Genome Information

Go to NCBI genomic BLAST page for Bipolaris maydis
   Trace records (raw single-pass reads of DNA sequence)   
Sequencing Center Name
Record counts per type
EST WGS ALL
JGI - Joint Genome Institute, U.S. Department of Energy
34,176 614,224 648,400
Totals per type
34,176 614,224 648,400

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Cochliobolus heterostrophus (Drechsler) Drechsler 1934 taxonomy/phylogenetic Encyclopedia of life
4 records from this provider organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Cochliobolus heterostrophus culture/stock collections Global Catalogue of Microorganisms
3 records from this provider taxonomy/phylogenetic Index Fungorum
2761201715: Bipolaris maydis ATCC 48331 organism-specific Integrated Microbial Genomes
3 records from this provider taxonomy/phylogenetic MycoBank
Bipolaris maydis (taxon passport) culture/stock collections StrainInfo
3 records from this provider taxonomy/phylogenetic Systematic Mycology and Microbiology Laboratory, Fungal Databases
Cochliobolus heterostrophus taxonomy/phylogenetic TreeBase
2 records from this provider organism-specific WebScipio - eukaryotic gene identification
2 records from this provider organism-specific diArk - a resource for eukaryotic genome research
Wikipedia taxonomy/phylogenetic iPhylo
Notes:
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A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.


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