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Taxonomy browser (Nicotiana attenuata)

Nicotiana attenuata

Taxonomy ID: 49451 (for references in articles please use NCBI:txid49451)
current name
Nicotiana attenuata Torr. ex S.Watson, 1871
NCBI BLAST name: eudicots
Rank: species
Genetic code: Translation table 1 (Standard)
Mitochondrial genetic code: Translation table 1 (Standard)
Plastid genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliopsida; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
   Entrez records   
Database name Direct links
Nucleotide 185,266
Protein 78,689
GEO Datasets 501
PubMed Central 1,331
Gene 40,175
SRA Experiments 1,829
Identical Protein Groups 52,646
BioProject 53
BioSample 1,604
Datasets Genome 3
Taxonomy 1

Comments and References:

image:Nicotiana attenuata
Image by Stan Shebs from Wikimedia Commons under a CC BY-SA license.
* Image may not have been verified for accuracy by NCBI Taxonomy.
GRIN (Oct 21, 2009)
Name verified on 21 October 2009 in: USDA, ARS, National Genetic Resources Program. Germplasm Resources Information Network - (GRIN) [Online Database]. National Germplasm Resources Laboratory, Beltsville, Maryland.

Genome Information

Go to NCBI genomic BLAST page for Nicotiana attenuata

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Nicotiana attenuata taxonomy taxonomy/phylogenetic Arctos Specimen Database
Nicotiana attenuata taxonomy/phylogenetic CalPhotos
dryaddb supplemental materials Dryad Digital Repository - Access Curated Datasets
Nicotiana attenuata Torr. ex S. Wats. taxonomy/phylogenetic Encyclopedia of life
GOLD: 2 Organisms organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Nicotiana attenuata Torr. ex S. Wats. taxonomy/phylogenetic Integrated Taxonomic Information System
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Nicotiana attenuata taxonomy/phylogenetic PLANTS Database (USDA/NRCS)
Nicotiana attenuata (Torr. ex S.Watson) herbarium/museum collections PlantaeDB, University of Bucharest
Nicotiana attenuata taxonomy/phylogenetic Plants of the World Online
Nicotiana attenuata taxonomy/phylogenetic The International Plant Names Index
Nicotiana attenuata Torr. ex S. Watson taxonomy/phylogenetic USDA-ARS GRIN Taxonomy
search W3TROPICOS taxonomy/phylogenetic Vascular Tropicos
WebScipio: Nicotiana attenuata organism-specific WebScipio - eukaryotic gene identification
2 records from provider organism-specific diArk - a resource for eukaryotic genome research
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

Organism modifiers

To hide organism modifiers click here
strain
Inbred Line Utah DI92 [1 28] UT [2 1 93641 77592 53]
cultivar
Arizona 22x inbred [2 3 1] Utah inbred line DI92 [1 1]
isolate
133 [1 1 1] 138 [1 1 1] 149 [1 1 1] 176 [1 1 1]
179 [1 1 1] 194 [1 1 1] 214 [1 1 1] 224 [1 1 1]
22645 [2 2] 278 [1 1 1] 304 [1 1 1] 305 [1 1 1]
308 [1 1 1] 331 [1 1 1] 341 [1 1 1] 351 [1 1 1]
382 [1 1 1] 384 [1 1 1] 421 [1 1 1] 422 [1 1 1]
43 [1 1 1] 84 [1 1 1] 85 [1 1 1] 97 [1 1 1]
APR 1047 [1 1] APR 5452 [1 1] Arizona [2 1 2] CGS 542 [1 1]
MS 90 [1 1] MTK 3797 [1 1] MTN 3411 [1 1] Na555476-N' [1]
OAS-TL 1656 [1 1] OAS-TL 694 [1 1] R009 [1 1 1] SAMS 113 [1 1]
SAMS 140 [1 1] SIR 682 [1 1] SULTR 1321 [1 1] UT31x [1 3 13 193]
Univ. of Birmingham, Solanaceae seed collection, # BIRM S.1001 [1 2] Utah [1 1 1]
specimen-voucher
CCDB-24913-E11 [1 1] CCDB-24913-F11 [2 1] CCDB-24913-G11 [2 1] Helgason and Monro 621 (BM) [1]
Nijmegen Botanical Garden 92475008 [1 1]
authority
Nicotiana attenuata Torr. [1 1]
ecotype
Arizona [3 1 6] Utah [121 4 10 10 108]
breed
30x inbred [2 1 37 35]
bio-material
Kew DNA bank 12610 [1 1 1] PI555476 [1]

Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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