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Taxonomy browser (Coffea canephora)

Coffea canephora

Taxonomy ID: 49390 (for references in articles please use NCBI:txid49390)
current name
Coffea canephora Pierre ex A.Froehner
NCBI BLAST name: eudicots
Rank: species
Genetic code: Translation table 1 (Standard)
Mitochondrial genetic code: Translation table 1 (Standard)
Plastid genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
heterotypic synonym
Coffea canephora var. robusta (L.Linden) A.Chev.
heterotypic synonym
Coffea robusta L.Linden
common name(s) robusta coffee
Lineage( full )
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliopsida; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
   Entrez records   
Database name Subtree links Direct links
Nucleotide 226,107 226,072
Protein 26,358 26,358
Structure 5 5
Genome 1 1
Popset 34 34
GEO Datasets 17 17
UniGene 5,231 5,231
PubMed Central 459 459
Gene 133 133
SRA Experiments 218 218
Identical Protein Groups 25,974 25,974
Bio Project 19 19
Bio Sample 149 149
Assembly 1 1
Probe 235 235
Taxonomy 2 1

Comments and References:

GRIN taxonomy
Name verified on date of entry into database in: USDA, ARS, National Genetic Resources Program. Germplasm Resources Information Network - (GRIN) [Online Database]. National Germplasm Resources Laboratory, Beltsville, Maryland.
TROPICOS (Mar 20, 2012)
Name verified on 20 Mar 2012 in: Tropicos.org. Missouri Botanical Garden, 2008 - 4344 Shaw Boulevard, Saint Louis, Missouri 63110, U.S.A. on line at: http://www.tropicos.org/
World Checklist of Rubiaceae (Mar 13, 2017)
Name accessed on 13 March 2017 in: Govaerts, R., Ruhsam, M., Andersson, L., Robbrecht, E., Bridson, D., Davis, A., Schanzer, I. & Sonke, B. World Checklist of Rubiaceae. The Board of Trustees of the Royal Botanic Gardens, Kew. Published on the Internet; http://www.kew.org/wcsp/rubiaceae/

Genome Information

Go to NCBI genomic BLAST page for Coffea canephora
Genome view: 11 chromosomes
Names 1 2 3 4 5 6 7 8 9 10 11

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Coffea canephora Pierre ex A. Froehner taxonomy/phylogenetic Encyclopedia of life
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Coffea canephora Pierre ex Froehner taxonomy/phylogenetic Integrated Taxonomic Information System
Coffea canephora taxonomy/phylogenetic PLANTS Database (USDA/NRCS)
2 records from this provider taxonomy/phylogenetic Plants of the World Online
2 records from this provider taxonomy/phylogenetic The International Plant Names Index
2 records from this provider taxonomy/phylogenetic USDA-ARS GRIN Taxonomy
search W3TROPICOS taxonomy/phylogenetic Vascular Tropicos
WebScipio: Coffea canephora organism-specific WebScipio - eukaryotic gene identification
diArk: Coffea canephora organism-specific diArk - a resource for eukaryotic genome research
Wikipedia taxonomy/phylogenetic iPhylo
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.


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