Link to NCBI Front Page Taxonomy Logo
Entrez PubMed Nucleotide Protein Genome Structure PMC Taxonomy BioCollections
   
Taxonomy browser (Rhizophagus intraradices)

Rhizophagus intraradices

Taxonomy ID: 4876 (for references in articles please use NCBI:txid4876)
current name
Rhizophagus intraradices (N.C. Schenck & G.S. Sm.) C. Walker & A. Schuessler 2010
basionym:
Glomus intraradices N.C. Schenck & G.S. Sm., 1982
holotype of Glomus intraradices: OSC:40255
epitype of Glomus intraradices: E:W5719
NCBI BLAST name: glomeromycetes
Rank: species
Genetic code: Translation table 1 (Standard)
Mitochondrial genetic code: Translation table 4 (Mold Mitochondrial; Protozoan Mitochondrial; Coelenterate Mitochondrial; Mycoplasma; Spiroplasma)
Lineage( full )
cellular organisms; Eukaryota; Opisthokonta; Fungi; Fungi incertae sedis; Mucoromycota; Glomeromycotina; Glomeromycetes; Glomerales; Glomeraceae; Rhizophagus
   Entrez records   
Database name Direct links
Nucleotide 49,156
Protein 218
GEO Datasets 22
PubMed Central 1,244
Gene 49
SRA Experiments 16
Identical Protein Groups 163
BioProject 4
BioSample 32
Taxonomy 1

Comments and References:

Walker C et al. (2021), other link:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8687058/
Walker C, Schüsler A, Vincent B, Cranenbrouck S, Declerck S. 2021. Anchoring the species Rhizophagus intraradices (formerly Glomus intraradices). Fungal Syst Evol 8:179-201.
Schuessler, A & Walker, C (2010)
Schuessler, A. and Walker, C. 2010. The Glomeromycota: a species list with new families and new genera 1-58. electronic publication. Available at: www.amf-phylogeny.com

Genome Information

Go to NCBI genomic BLAST page for Rhizophagus intraradices

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Glomus intraradices N.C. Schenck & G.S. Sm. 1982 taxonomy/phylogenetic Index Fungorum
Glomus intraradices N.C. Schenck & G.S. Smith taxonomy/phylogenetic MycoBank
Glomus intraradices taxonomy/phylogenetic TreeBase
diArk: Glomus intraradices organism-specific diArk - a resource for eukaryotic genome research
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

Organism modifiers

To hide organism modifiers click here
strain
1 [1 1] 1511C0001BGCAM0042 [1 1] 2 [1 1] 2018-09-SN-HBY2-3 [1]
3 [1 1] 4 [1 1] 4695rac-11G2 (GINCO) [1] 5 [1 1]
6 [1 1] 7 [1 1] 8 [1 1] AMykor [1 1]
AZ151-A [1 1] BEG 140 [2] BEG 72 [1] BEG141 [3]
BEG144 [1 1] BEG145 [6 1] BEG158 [1 1 1] BEG193 [12 1]
BEG75 [1] BR846 [2 1 2] Belgian Coordination Collection of Microorganisms #MUCL43194 [1] DAOM 181602 [4 43509]
DAOM 197198 [3 1 3] DAOM 197198, Biosystematic Research Center, Ottawa [1 699] DAOM 225240 [4 1 4] DAOM 225240; INVAM KS906 [3 3]
DAOM181602 [2] DQF11 [1] DQF12 [1] DQF13 [1]
DQF14 [1] DQF15 [1] DQF16 [1] EY108 [1 1]
Ey118 [4] FL208 [11 1] FL208 = Att4-38 [2] GA10 [1]
GA11 [1 1] GA2 [1 1] GA3 [1 1] GA5 [1]
GB1 [1 1] GB2 [1 1] GC1 [1 1] GC2 [1 1]
GC3 [1 1] GC4 [1 1] GI-15 [1] GINCO #4695rac-11G2 [5 4 3]
GINCO 4695rac-11G2 [5 4 3] GR104 [4] GX10 [1 1] GX3 [1 1]
GX7 [1 1] IRBV [2 1 2] IS101 [7] JC093 [1]
KS906 [5] LMR493.2P1 [1 1] LMR497.7P4 [1 1] LMR502.2P3 [1 1]
LMR509.6P1 [1 1] LMR513.7P1 [1 1] LMR515.8P1 [1 1] LMR520.9P2 [1 1]
LMR522.9PT [1 1] LMR524.10PT [1 1] LMR525.8P3 [1 1] LMR527.1P4 [1 1]
LMR531.3P1 [1 1] LMR534.4P3 [1 1] LMR541.9P3 [1 1] LMR546.11P3 [1 1]
LMR547.11P4 [1 1] LMR555.13P2 [1 1] LMR556.13P4 [1 1] LMR560.14P3 [1 1]
LMR561.14P4 [1 1] LMR564.15P3 [1 1] LMR565.15P4 [1 1] M26 [1 1]
MD211 [1] MUCL 43194 [2 1] MUCL 43194 = DAOM 197198 = DAOM 181602 [1] MUCL 43194 = DAOM 197198 = DAOM181602 [10]
MUCL43194 [1] MUCL49413 [1 1] MUCL52327 = MAFF520088 [7] NB101 [1]
NB106 [2] SAC-3(1) [1] SSPL011 [1] SW103 [2]
Sy167 [2 3] TU101 [1 1] UK128 [2 1] UK131 [2 1]
VA110 [3] VTT26-8 [1 1 1] WV230-1 [1 1 1] WY_11-1 [1]
WY_11-2 [1] WY_11-4 [1] WY_13-1 [1] WY_13-2 [1]
WY_13-3 [1] WY_18-1 [1] WY_18-3 [1] WY_18-4 [1]
WY_5-1 [1] WY_5-2 [1] WY_5-3 [1]
cultivar
DAOM 197198 [1 1]
group
A_b [7]
isolate
000 [9 9] 001_A05_26351 [1] 003_A07_3174 [1] 007_A04_23089 [1]
008_A02_26765 [1] 008_A07_13651 [1] 009_A02_23904 [1] 009_A04_19132 [1]
012_A02_29761 [1] 012_A04_23487 [1] 013_A03_3430 [1] 014_A02_20187 [1]
017_A04_18938 [1] 022_A04_21953 [1] 023_A04_8730 [1] 023_A07_12556 [1]
024_A01_6835 [1] 026_A05_2335 [1] 027_A05_504 [1] 030_A02_329 [1]
030_A05_21259 [1] 031_A04_24970 [1] 031_A05_7587 [1] 032_A03_28222 [1]
032_A05_19710 [1] 034_A02_27920 [1] 034_A03_19211 [1] 036_A05_12855 [1]
038_A03_20533 [1] 038_A04_22703 [1] 040_A02_27156 [1] 040_A03_8981 [1]
041_A03_14588 [1] 041_A04_21680 [1] 042_A02_22846 [1] 042_A03_25336 [1]
043_A02_16158 [1] 043_A03_24314 [1] 045_A03_9438 [1] 046_A04_503 [1]
048_A02_17794 [1] 050_A02_29408 [1] 050_A06_1586 [1] 051_A02_6866 [1]
052_A04_7093 [1] 054_A02_26340 [1] 056_A04_26243 [1] 057_A04_29029 [1]
057_A05_27 [1] 066_A03_29832 [1] 067_A04_8094 [1] 067_A06_134 [1]
068_A01_7691 [1] 073_A03_12499 [1] 074_A02_23294 [1] 074_A04_1167 [1]
077_A04_22808 [1] 078_A02_27279 [1] 079_A04_19331 [1] 084_A03_16748 [1]
087_A04_16162 [1] 08_37_1 [1 1] 08_45_20 [1 1] 08_45_26 [1 1]
08_62_14 [1 1] 08_62_38 [1 1] 08_62_4 [1 1] 08_62_9 [1 1]
090_A04_12545 [1] 091_A03_17281 [1] 092_A03_14249 [1] 092_A06_7394 [1]
093_A02_11350 [1] 094_A02_30376 [1] 098_A04_15621 [1] 099_A03_13884 [1]
100_A03_4331 [1] 101_A04_3757 [1] 101_A05_3522 [1] 103_A02_25153 [1]
105_A02_28030 [1] 108_A03_13288 [1] 109_A05_8911 [1] 111_A03_20655 [1]
112_A02_22571 [1] 112_A03_3993 [1] 114_A02_21917 [1] 115_A03_10463 [1]
117_A02_28981 [1] 121_A02_12084 [1] 124_A03_5486 [1] 125_A02_22280 [1]
125_A04_4229 [1] 126_A03_5921 [1] 126_A04_24611 [1] 129_A02_19840 [1]
129_A04_10502 [1] 129_A06_2295 [1] 130_A04_11189 [1] 131_A03_15322 [1]
132_A03_9449 [1] 137_A02_20659 [1] 140_A02_29184 [1] 143_A07_841 [1]
144_A05_13531 [1] 145_A04_17947 [1] 148_A03_27284 [1] 149_A02_23556 [1]
150_A02_19769 [1] 151_A05_12960 [1] 152_A03_5940 [1] 156_A04_76 [1]
157_A04_4127 [1] 158_A01_3994 [1] 159_A04_22903 [1] 163_A04_19366 [1]
166_A05_11436 [1] 170_A04_15741 [1] 173_A05_4205 [1] 187_A03_28279 [1]
189_A04_28187 [1] 192_A05_162 [1] 199_A05_349 [1] 200_A04_2056 [1]
201_A05_612 [1] 203_A03_2946 [1] 209_A04_20276 [1] 212_A03_4104 [1]
214_A03_14667 [1] 216_A03_10343 [1] 224_A03_24157 [1] 224_A04_15297 [1]
229_A03_16070 [1] 229_A04_23576 [1] 230_A05_23336 [1] 232_A04_22972 [1]
240_A04_1998 [1] 244_A04_28944 [1] 2466 [1] 250_A04_17527 [1]
250_A05_29443 [1] 253_A03_23996 [1] 258_A04_11949 [1] 259_A04_1795 [1]
261_A03_17394 [1] 262_A05_8540 [1] 266_A03_27325 [1] 267_A03_23582 [1]
269_A03_24863 [1] 270_A05_10388 [1] 272_A03_21635 [1] 284_A03_18162 [1]
291 [6 6] 292_A03_4972 [1] 293_A03_9248 [1] 2abe [1]
304_A03_12296 [1] 304_A05_11901 [1] 316_A03_29758 [1] 324_A03_27001 [1]
325_A03_27928 [1] 326_A03_13562 [1] 334_A05_3951 [1] 335_A05_14503 [1]
340_A05_17981 [1] 352_A05_29500 [1] 372_A05_6744 [1] 397_A05_22108 [1]
403_A05_989 [1] 410_A05_12424 [1] 432_A05_2534 [1] 436_A05_2261 [1]
440_A05_24562 [1] 442_A05_13425 [1] 467_A05_28012 [1] 472_A05_27467 [1]
473_A05_14864 [1] 475_A05_23130 [1] 494_A05_18485 [1] 4fd4 [1]
502_A05_19898 [1] 512_A05_20807 [1] 516_A05_8753 [1] 518_A05_5168 [1]
541_A05_25512 [1] 547_A05_20730 [1] 549_A05_18679 [1] 568_A05_737 [1]
569_A05_322 [1] 56d3 [1] 587_A05_11960 [1] 597_A05_12340 [1]
600_A05_21186 [1] 609_A05_2327 [1] 628_A05_7221 [1] 645_A05_9566 [1]
647_A05_4378 [1] 658_A05_29633 [1] 664_A05_22970 [1] 7e16 [1]
7eaf [1] 87fb [1] A1 [1 1] A2 [2 1]
A4 [3 1] A6 [1 1] AFTOL-ID #48 [3] AFTOL-ID #845 [6 4 3]
AFTOL-ID 48 [3] AFTOL-ID 845 [6 4 3] AFTOL-ID-845 [6 4 3] AU212B [3]
AZ151 [1 1] Att 4-38 [13] Att1102-12 [5] Att4-38 [1]
Att4-41 [16] Att4-64 [11] B1 [2 1 1] B11 [1 1]
B13 [1 1] B21-18 [1 1] B21-9 [1 1] B22-11 [1 1]
B22-5 [1 1] B22-9 [1 1] B3 [1 1] B4 [1 1 1]
BCR 19 [1] BEG 121 [1] BEG 140 [6] BEG 75 [3]
BEG123 [1] BEG140 [9 1] BEG141 [6 6] BEG145-01 [1 1]
BEG145-02 [1 1] BEG145-03 [1 1] BEG145-04 [1 1] BEG145-05 [1 1]
BEG145-06 [1 1] BEG158 [6 2] BEG193-01 [1 1] BEG193-02 [1 1]
BEG193-03 [1 1] BEG193-04 [1 1] BEG193-05 [1 1] BEG193-06 [1 1]
BEG193-07 [1 1] BEG193-08 [1 1] BEG193-09 [1 1] BEG193-10 [1 1]
BEG193-11 [1 1] BEG193-12 [1 1] BEG195 [1 34] BEG75 [6]
C1-F [1 1] C13_13 [1 1] C1_21 [1 1] C2 [1 10 1 4 1]
C3 [11 1 2] C5 [2 1] C7 [1 1 1] CA502 [3]
CC-4 [5] CR1 [1 1] CR316A [3 1] Chomutov [5]
D1 [2 2 1] D2 [1] D3_16 [1 1] D3_28 [1 1]
DAOM 161802 [5 5] DAOM 181 602 [4 2] DAOM 181602 [1 32 4] DAOM 197198 [59 1]
DAOM-197198 [59 1] DAOM181602 [1 43 2 3] DAOM197198 [10 1 8] DD-4 [3]
DDAM-1 [1] DGPS-GI [1] Duernast [3] E1 [2 1 1]
E1_21 [1 1] E2_2 [1 1] E2_35 [1 1] E4_22 [1 1]
E4_29 [1 1] E4_42 [1 1] E4_9 [1 1] E5_11 [1 1]
E5_18 [1 1] E5_7 [1 1] E6_51 [1 1] E6_53 [1 1]
E6_56 [1 1] EEZ1 [1] EW uncultured Rhizophagus intraradices [6] FACE#494 [2 40]
FL208 [9 1] FL208 (Att4-38) [2] FL208A [6 1 1] FL730 [1 1 1]
FNSP5 [1] G1 [1 1] GI1 [2] GI2 [2]
GI3 [1] GI4 [1] GiBCHS1 [1 1 1] GiBCHS2 [1 1 1]
GiCHS2 [1 1 1] GiCHS3 [1 1 1] GiVCHS2 [1 1 1] GiWCHS2 [1 1 1]
Gint01 [1 1] Gint02 [1 1] Gint03 [1 1] Gint04 [1 1]
Gint05 [1 1] Glomus_KKU_Wh [1] Greenical VAM [1] HDAM-1 [2]
H_E [1 1] IA5606 [1 1 1] ID101 [1 1 1] IMA6 [1]
IND-88 [1] IS185 [1 1] JA202 [3] JJ141 [3 1]
JJ145 [3 1] JJ183 [5] Jwan-11 [1] Jx-am4101 [1]
KE114 [3] KISAN_1 [1] LPA8 [2] LW uncultured Rhizophagus intraradices [2]
Les Muralles 1 [1] ML110 [2 1] MUCL43194; DAOM 197198 [39] MULSSK_OS9 [1]
Mas Badia [1] Myco-Gro [1] N12_39 [1 1] N22_2 [1 1]
N25_7 [1 1] N3 [1 1] NB102C [4 1 2] Nr 141 [1]
Nr 291 [1] Nr 746 [1] OTU16 [1 1] OTU36 [1 1]
OTU59 [1 1] OTU61 [1 1] OTU64 [1 1] OTU67 [1 1]
OTU69 [1 1] OTU_11 [1 1] OTU_296 [1] PACS [1]
PH5 [6] PL112A [1 1 1] Q11m154F07F [1] Q12074B10 [1]
Q1238F05 [1] Q1339G05 [1] Q1340H05 [1] Q1441A06 [1]
Q15934B05 [1] QE102 [1] RMI_141 [1] RWI_141 [1]
Rhin1-Spore [1] Roots [1] S892-1 [1 1] SI_141 [1]
SREF106 [1] SREF1878 [1] SREF226 [1] SREF557 [1]
SREF731 [1] SREF759 [1] SSPL006 [1] SSPL007-2 [1]
SSPL008-2 [1] SSPL009-1 [1] Soil_Fungi39 [1] Swiss isolate H [1 1]
T8 [1] Tu101 [1 1] UK128 [1 1] UK131 [1 1]
VA110 [5] W5985 [1] WV795 [1 1 1] abd4 [1]
ba1a [1] c736 [1] d07bde8dcf0cc60b0d51f84131404674 [1] d739 [1]
glom1 [1] intra1 [2 1] intra10 [1 1] intra11 [1 1]
intra12 [1 1] intra2 [2 1] intra3 [2 1] intra4 [2 1]
intra5 [1 1] intra6 [1 1] intra7 [1 1] intra8 [1 1]
intra9 [1 1] j12-intra [1] j13-intra [1] n21_1 [1 1]
soil [1]
specimen-voucher
1MT-N0 [1] AH01 [2 2] DAOM 181 602 [32] DAOM 197198 [2 1]
DAOM:197198 [2 1] FL208, W5273 [1] RFLP7 [4] RFLP8 [1]
RFLP9 [2] W5070 [5] W5166 [17] W5413 [16]
W5507 [11] W5719 [7]
ecotype
laurel forest [93] low-land scrub zone [93]
culture-collection
BEG:141 [3] BEG:144 [1] DAOM:181602 [2] DAOM:197198 [3 3]
INVAM:FL208 [40] MUCL:43194 [1 1] MUCL:49410 [5] MUCL:52327 [7]

Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


Comments and questions to info@ncbi.nlm.nih.gov

[Help] [Search] [NLM NIH] [Disclaimer]