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Taxonomy browser (Allium cepa)

Allium cepa

Taxonomy ID: 4679 (for references in articles please use NCBI:txid4679)
Scientific name: Allium cepa L.
Genbank common name: onion
Inherited blast name: monocots
Rank: species
Genetic code: Translation table 1 (Standard)
Mitochondrial genetic code: Translation table 1 (Standard)
Plastid genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Amaryllidaceae; Allioideae; Allieae; Allium
   Entrez records   
Database name Subtree links Direct links
Nucleotide 578,361 578,349
Nucleotide EST 20,204 20,204
Nucleotide GSS 10,725 10,725
Protein 1,262 1,250
Structure 5 5
Genome 1 1
Popset 109 109
GEO Datasets 63 63
PubMed Central 1,948 1,948
Gene 179 179
SRA Experiments 260 255
Identical Protein Groups 482 472
Bio Project 33 30
Bio Sample 273 267
Probe 237 237
PubChem BioAssay 47 47
Taxonomy 2 1

Comments and References:

Nota BeneGRIN (Jul 27, 2018)
Name accessed on 27 July 2018 in: USDA, ARS, National Genetic Resources Program. Germplasm Resources Information Network - (GRIN) [Online Database]. National Germplasm Resources Laboratory, Beltsville, Maryland.

Nota BeneFNA - Allium
McNeal DW, Jr. and Jacobsen TD. 2002. Allium Linnaeus, Sp. Pl. 1: 294. 1753; Gen. Pl. ed. 5, 143. 1754. In Flora of North America Editorial Committee (Eds.) Flora of North America North of Mexico, Volume 26: Magnoliophyta: Liliidae: Liliales and Orchidales.

Nota BeneFlora of China - Liliaceae
Xinqi Chen et al. 2000. Liliaceae. In Wu, Z. Y. & P. H. Raven, eds. Flora of China. Vol. 24 (Flagellariaceae through Marantaceae). Science Press, Beijing, and Missouri Botanical Garden Press, St. Louis. Online at Flora of China:

Genome Information

Go to NCBI genomic BLAST page for Allium cepa
Genome view: 9 chromosomes
Names 1 2 3 4 5 6 7 8 Pltd

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Allium cepa L. taxonomy/phylogenetic Encyclopedia of life
3 records from this provider organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Allium cepa L. taxonomy/phylogenetic Integrated Taxonomic Information System
Allium cepa taxonomy/phylogenetic PLANTS Database (USDA/NRCS)
Allium cepa taxonomy/phylogenetic The International Plant Names Index
Allium cepa L. taxonomy/phylogenetic USDA-ARS GRIN Taxonomy
search W3TROPICOS taxonomy/phylogenetic Vascular Tropicos
2 records from this provider organism-specific WebScipio - eukaryotic gene identification
4 records from this provider organism-specific diArk - a resource for eukaryotic genome research
Allium cepa taxonomy/phylogenetic electronic Plant Information Centre
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Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

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