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Taxonomy browser (Oryza glaberrima)

Oryza glaberrima

Taxonomy ID: 4538 (for references in articles please use NCBI:txid4538)
current name
Oryza glaberrima Steud.
Genbank common name: African rice
NCBI BLAST name: monocots
Rank: species
Genetic code: Translation table 1 (Standard)
Mitochondrial genetic code: Translation table 1 (Standard)
Plastid genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( abbreviated )
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
   Entrez records   
Database name Direct links
Nucleotide 509,593
Protein 1,926
Genome 1
Popset 176
GEO Datasets 15
PubMed Central 304
Gene 127
SRA Experiments 659
Identical Protein Groups 937
Bio Project 29
Bio Sample 502
Assembly 2
Probe 1
Taxonomy 1

Comments and References:

Sweeney M & McCouch S 2007, other link:http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2759204/?tool=pubmed
Sweeney M and McCouch S. 2007. The complex history of the domestication of rice. Annals of Botany 100(5): 951-957.
Flora of China - Poaceae
Chen S-L et al. 2006. Poaceae (R. Brown) Barnhart. In Wu, Z. Y., P. H. Raven & D. Y. Hong, eds. Flora of China. Vol. 22 (Poaceae). Science Press, Beijing, and Missouri Botanical Garden Press, St. Louis. Online at Flora of China: www.efloras.org
TROPICOS (Aug 27, 2015)
Name accessed on 27 August 2015 in: Tropicos.org. Missouri Botanical Garden, 2008 - 4344 Shaw Boulevard, Saint Louis, Missouri 63110, U.S.A. on line at: http://www.tropicos.org/
GRIN (Oct 18, 2016)
Name accessed on 18 October 2016 in: USDA, ARS, National Genetic Resources Program. Germplasm Resources Information Network - (GRIN) [Online Database]. National Germplasm Resources Laboratory, Beltsville, Maryland.

Genome Information

Go to NCBI genomic BLAST page for Oryza glaberrima

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
4 records from this provider supplemental materials Dryad Digital Repository
Oryza glaberrima Steudel taxonomy/phylogenetic Encyclopedia of life
4 records from this provider organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Oryza glaberrima Steudel taxonomy/phylogenetic Integrated Taxonomic Information System
Oryza glaberrima taxonomy/phylogenetic Lifemap
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Oryza glaberrima taxonomy/phylogenetic PLANTS Database (USDA/NRCS)
Oryza glaberrima taxonomy/phylogenetic Plants of the World Online
Oryza glaberrima taxonomy/phylogenetic The International Plant Names Index
Oryza glaberrima Steud. taxonomy/phylogenetic USDA-ARS GRIN Taxonomy
search W3TROPICOS taxonomy/phylogenetic Vascular Tropicos
WebScipio: Oryza glaberrima organism-specific WebScipio - eukaryotic gene identification
2 records from this provider organism-specific diArk - a resource for eukaryotic genome research
Wikipedia taxonomy/phylogenetic iPhylo
Notes:
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Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.


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