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Taxonomy browser (Mucoromycotina)

Mucoromycotina

Taxonomy ID: 451507 (for references in articles please use NCBI:txid451507)
current name
Mucoromycotina
NCBI BLAST name: fungi
Rank: subphylum
Genetic code: Translation table 1 (Standard)
Mitochondrial genetic code: Translation table 4 (Mold Mitochondrial; Protozoan Mitochondrial; Coelenterate Mitochondrial; Mycoplasma; Spiroplasma)
Other names:
in-part
Zygomycota
Lineage( full )
cellular organisms; Eukaryota; Opisthokonta; Fungi; Fungi incertae sedis; Mucoromycota
   Entrez records   
Database name Subtree links Direct links
Nucleotide 208,748 -
Protein 351,456 -
Structure 55 -
Genome 40 -
Popset 969 697
Conserved Domains 1 -
GEO Datasets 240 -
PubMed Central 7,953 385
Gene 28,062 -
SRA Experiments 1,590 -
Identical Protein Groups 305,026 -
Bio Project 695 -
Bio Sample 1,106 -
Assembly 74 -
Probe 5 -
PubChem BioAssay 945 -
Taxonomy 1,400 1

Comments and References:

Hibbett et al. (2007)
Hibbett DS, Binder M, Bischoff JF, Blackwell M, Cannon PF, Eriksson OE Huhndorg S, James T, Kirk PM, Lucking R, Lumbsch T, Lutzoni F, Matheny PB, McLaughlin D, Powell MJ, Redhead S, Schoch CL, Spatafora JW, Stalpers JA, Vilgalys R, Aime CA, Aptroot A, Bauer R, Begerow D, Benny GL, Castlebury LA, Crous PW, Dai Y-C, Gams W, Geiser DM, Griffith GW, Gueidan C, Hawksworth DL, Hestmark G, Hosaka K, Humber RA, Hyde K, Ironside JE, Koljalg U, Kurtzman CP, Larrson K-H, Lichtwardt R, Longcore J, Mia Klikowska J, Miller A, Moncalvo J-M, Mozley-Standridge S, Oberwinkler F, Parmasto E, Reeb V, Rodgers JD, Roux C, Ryvarden L, Sampaio JP< Schussler A, Sugiyama J, Thorn RG, Tibell L, Untereiner WA, Walker C, Wang Z, Weir A, Weiss M, White MM, Winka K, Yao Y-J, Zhang N. 2007. A higher-level phylogenetic classification of the Fungi. Mycological Research 111: 509-547.
Polyphyly of Zygomycota
Results of Liu et al. (2006) supported the monophyly of the traditional Zygomycota (Mucorales, Glomerales, Entomophthorales, and Harpellales) but James et al. (2006), which included broader sampling and additional molecular loci, found Zygomycota to be polyphyletic. Until the basal fungal lineages are more clearly resolved the traditional groups of Zygomycota have been broken up and placed into distinct subphyla (Hibbett et al. 2007).
James et al. (2006)
James TY, Kauff F, Schoch CL, Matheny PB, Hofstetter V, Cox C, Celio G, Gueidan C, Fraker E, Miadlikowska J, Lumbsch HT, Rauhut A, Reeb V, Arnold EA, Amtoft A, Stajich JE, Hosaka K, Sung G-H, Johnson D, O'Rourke B, Crockett M, Binder M, Curtis JM, Slot JC, Wang Z, Wilson AW, Schler A, Longcore JE, O'Donnell K, Mozley-Standridge S, Porter D, Letcher PM, Powell MJ, Taylor JW, White MM, Griffith GW, Davies DR, Humber RA, Morton J, Sugiyama J, Rossman AY, Rogers JD, Pfister DH, Hewitt D, Hansen K, Hambleton S, Shoemaker RA, Kohlmeyer J, Volkmann-Kohlmeyer B, Spotts RA, Serdani M, Crous PW, Hughes KW, Matsuura K, Langer E, Langer G, Untereiner WA, Lcking R, Bdel B, Geiser DM, Aptroot A, Diederich P, Schmitt I, Schultz M, Yahr R, Hibbett DS, Lutzoni F, McLaughlin D, Spatafora J, Vilgalys R, 2006. Reconstructing the early evolution of the fungi using a six gene phylogeny. Nature 443: 818-822.
Liu YJ et al. (2006)
Liu YJ, Hodson MC, Hall BD, 2006. Loss of the flagellum happened only once in the fungal lineage: phylogenetic structure of kingdom Fungi inferred from RNA polymerase II subunit genes. BMC Evolutionary Biology 6: 74.
Tanabe et al. (2004)
Tanabe Y, Saikawa M, Watanabe MM, Sugiyama J. Molecular phylogeny of Zygomycota based on EF-1alpha and RPB1 sequences: limitations and utility of alternative markers to rDNA. (Mol Phylogenet Evol. 30: 438-449, 2004)
Spatafora et al. (2016), doi:10.3852/16-042
Spatafora JW, Chang Y, Benny GL, Lazarus K, Smith ME, Berbee ML, Bonito G, Corradi N, Grigoriev I, Gryganskyi A, James TY, O'Donnell K, Roberson RW, Taylor TN, Uehling J, Vilgalys R, White MM, Stajich JE. 2016. A phylum-level phylogenetic classification of zygomycete fungi based on genome-scale data. Mycologia. 108: 1028-1046.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Mucoromycotina taxonomy/phylogenetic Lifemap
2 records from this provider taxonomy/phylogenetic MycoBank
Mucoromycotina Benny, 2007 taxonomy/phylogenetic World Register of Marine Species
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