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Taxonomy browser (freshwater metagenome)

freshwater metagenome

Taxonomy ID: 449393 (for references in articles please use NCBI:txid449393)
current name
freshwater metagenome
equivalent:
fresh water metagenome
NCBI BLAST name: metagenomes
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Mitochondrial genetic code: Translation table 2 (Vertebrate Mitochondrial)
Plastid genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
unclassified entries; unclassified sequences; metagenomes; ecological metagenomes
   Entrez records   
Database name Direct links
Nucleotide 83,359
Protein 599,204
GEO Datasets 1
PubMed Central 26
SRA Experiments 152,667
Identical Protein Groups 361,600
BioProject 3,609
BioSample 144,283
Datasets Genome 703
Taxonomy 1

Genome Information

Go to NCBI genomic BLAST page for freshwater metagenome

Information from sequence entries

Organism modifiers

To hide organism modifiers click here
isolate
AHP [1 1] BBB [1 1] BCT [1 1] BK11-02 [1 1 1]
BRA [1 1] BRA2 [1 1] BS11-05 [1 1 1] BS13-02 [1 1 1]
BS13-10 [1 1 1] CPA [1 1] CWN [1 1] CWS [1 1]
DIB [1 1] EBR [1 1] F13-15 [1 1 1] FCP [1 1]
FRP [1 1] FSP [1 1] G11-01 [1 1 1] G11-04 [1 1 1]
G11-06 [1 1 1] G11-09 [1 1 1] G13-01 [1 1 1] G13-03 [1 1 1]
G13-05 [1 1 1] G13-07 [1 1 1] G13-09 [1 1 1] G13-10 [1 1 1]
G13-11 [1 1 1] G13-12 [1 1 1] GU0601 [1 1 1] ICC [1 1]
ICG [1 1] ILP [1 1] K13-05 [1 1 1] K13-06 [1 1 1]
K13-07 [1 1 1] K13-10 [1 1 1] KRB [1 1] KWW [1 1]
L111-01 [1 1 1] L211-07 [1 1 1] L211-101 [1 1 1] L211-11 [1 1 1]
L311-01 [1 1 1] LDP [1 1] LE13-04 [1 1 1] LG11-05 [1 1 1]
LG13-03 [1 1 1] LG13-11 [1 1 1] LG13-12 [1 1 1] LG13-13 [1 1 1]
LL11-07 [1 1 1] LL13-03 [1 1 1] LL13-06 [1 1 1] MLB [1 1]
MPB [1 1] MWW [1 1] S11-01 [1 1 1] S11-05 [1 1 1]
SVP [1 1] SX13-01 [1 1 1] SX13-11 [1 1 1] TBP [1 1]
UMC [1 1] W11-03 [1 1 1] W11-06 [1 1 1] W13-11 [1 1 1]
W13-13 [1 1 1] W13-15 [1 1 1] W13-16 [1 1 1] W13-18 [1 1 1]
sample_49613 [1 1] sample_49614 [1 1] sample_49615 [1 1] sample_49616 [1 1 1]
sample_49617 [1 1 1] sample_49618 [1 1] sample_49619 [1 1 1] sample_49620 [1 1 1]
sample_49621 [1 1] sample_49622 [1 1] sample_49623 [1 1 1] sample_49624 [1 1]
sample_49625 [1 1] sample_49626 [1 1 1] sample_49627 [1 1 1] sample_49628 [1 1]
sample_49629 [1 1] sample_49630 [1 1 1] sample_49631 [1 1 1] sample_49632 [1 1]
sample_49633 [1 1] sample_49634 [1 1 1] sample_49635 [1 1 1] sample_49636 [1 1]
sample_49637 [1 1] sample_49638 [1 1] sample_49639 [1 1 1] sample_49640 [1 1 1]
sample_49641 [1 1 1] sample_49642 [1 1 1] sample_53598 [1 1] sample_53599 [1 1]
sample_53600 [1 1] sample_53601 [1 1] sample_53602 [1 1] sample_53603 [1 1]
nat-host
Schoenoplectus californicus [15] macrofauna [1] water column [15]

Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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