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Taxonomy browser (Xanthomonas perforans)

Xanthomonas perforans

Taxonomy ID: 442694 (for references in articles please use NCBI:txid442694)
current name
Xanthomonas perforans Jones et al. 2006 in [Validation List No. 109 (2006)]
type strain of Xanthomonas perforans: personal::XV938, ATCC:BAA-983, DSM:18975, ICMP:16690, NCPPB:4321, CFBP:7293
NCBI BLAST name: g-proteobacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
heterotypic synonym
Xanthomonas euvesicatoria pv. perforans (Jones et al. 2006) Constantin et al. 2016
heterotypic synonym
Xanthomonas axonopodis pv. vesicatoria
Lineage( full )
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Lysobacterales; Lysobacteraceae; Xanthomonas
   Entrez records   
Database name Subtree links Direct links Links from type
Nucleotide 75,934 75,925 116
Protein 628,402 624,309 -
PubMed Central 205 205 -
Gene 22,507 22,507 -
SRA Experiments 1,023 1,023 -
Protein Clusters 876 876 -
Identical Protein Groups 92,461 92,337 -
BioProject 64 63 -
BioSample 1,133 1,131 6
Datasets Genome 715 712 -
Taxonomy 2 1 -

Comments and References:
Validation List No. 109 (2006), PubMed: abstract
Validation List No. 109. "List of new names and new combinations previously effectively, but not validly, published." Int. J. Syst. Evol. Microbiol. (2006) 56(5):925-927.
Constantin EC et al. (2016)
Constantin, E.C., Cleenwerck, I., Maes, M., Baeyen, S., Van Malderghem, C., De Vos, P., and Cottyn, B. "Genetic characterization of strains named as Xanthomonas axonopodis pv. dieffenbachiae leads to a taxonomic revision of the X. axonopodis species complex." Plant Pathol. (2016) 65:792-806. [No PubMed record available.]
Jones JB et al. (1998)
Jones, J.B., Stall, R.E., and Bouzar, H. "Diversity among xanthomonads pathogenic on pepper and tomato." Ann. Rev. Phytopathol. (1998) 36:41-58. [No PubMed record available.]
Jones JB et al. (2000)
Jones, J.B., Bouzar, H., Stall, R.E., Almira, E.C., Roberts, P.D., Bowen, B.W., Sudberry, J., Strickler, P.M., and Chun, J. "Systematic analysis of xanthomonads (Xanthomonas spp.) associated with pepper and tomato lesions." Int. J. Syst. Evol. Microbiol. (2000) 50:1211-1219.
Jones JB et al. (2004)
Jones, J.B., Lacy, G.H., Bouzar, H., Stall, R.E., and Schaad, N.W. "Reclassification of the xanthomonads associated with bacterial spot disease of tomato and pepper." Syst. Appl. Microbiol. (2004) 27:755-762. [Erratum: Syst. Appl. Microbiol. (2006) 29:85-86.]
Young JM et al. (2008)
Young, J.M., Park, D.C., Shearman, H.M., and Fargier, E. "A multilocus sequence analysis of the genus Xanthomonas." Syst. Appl. Microbiol. (2008) 31:366-377.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Xanthomonas perforans meta-databases BacDive - Free access to bacterial information database
Xanthomonas perforans Jones et al. 2006 taxonomy/phylogenetic Encyclopedia of life
GOLD: 47 Organisms organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Xanthomonas perforans culture/stock collections Global Catalogue of Microorganisms
134 records from this provider organism-specific Integrated Microbial Genomes
Xanthomonas perforans | SeqCode Registry taxonomy/phylogenetic SeqCode Registry
Notes:
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Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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