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Taxonomy browser (Ictidomys tridecemlineatus)

Ictidomys tridecemlineatus

Taxonomy ID: 43179 (for references in articles please use NCBI:txid43179)
Scientific name: Ictidomys tridecemlineatus
homotypic synonym: Citellus tridecemlineatus
homotypic synonym: Spermophilus tridecemlineatus (Mitchill, 1821)
Genbank common name: thirteen-lined ground squirrel
Inherited blast name: rodents
Rank: species
Genetic code: Translation table 1 (Standard)
Mitochondrial genetic code: Translation table 2 (Vertebrate Mitochondrial)
Lineage( abbreviated )
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Ictidomys
   Entrez records   
Database name Subtree links Direct links
Nucleotide 200,427 200,425
Protein 38,896 38,894
Genome 1 1
Popset 14 14
GEO Datasets 159 159
PubMed Central 362 362
Gene 28,259 28,259
SRA Experiments 343 343
Identical Protein Groups 33,522 33,522
Bio Project 16 16
Bio Sample 325 325
Assembly 3 3
Taxonomy 2 1

Genome Information

Go to NCBI genomic BLAST page for Ictidomys tridecemlineatus
Genome view: 18 chromosomes
Names 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 X Y
   Trace records (raw single-pass reads of DNA sequence)   
Sequencing Center Name
Record counts per type
CLONEEND OTHER PCR SHOTGUN TRANSPOSON WGS ALL
BCCAGSC - British Columbia Cancer Agency Genome Sciences Centre
7,244 - - - - - 7,244
BI - Broad Insititute
- 14 64 15,360 2,240 7,458,255 7,475,933
NISC - NIH Intramural Sequencing Center
- - - 643,773 - - 643,773
TIGR - The Institute for Genome Research
229 - - - - - 229
Totals per type
7,473 14 64 659,133 2,240 7,458,255 8,127,179

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Spermophilus tridecemlineatus taxonomy/phylogenetic Animal Diversity Web
3 records from this provider taxonomy/phylogenetic Arctos Specimen Database
Spermophilus tridecemlineatus (Mitchill, 1821) taxonomy/phylogenetic Encyclopedia of life
GOLD: Go0013949 organism-specific Genomes On Line Database
Spermophilus tridecemlineatus (Mitchill, 1821) taxonomy/phylogenetic Integrated Taxonomic Information System
Spermophilus tridecemlineatus Mitchill 1821 taxonomy/phylogenetic Mammal Species of the World
MamTex taxonomy/phylogenetic Mammals of Texas
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Spermophilus tridecemlineatus taxonomy/phylogenetic Smithsonian: North American Mammals
WebScipio: Spermophilus tridecemlineatus organism-specific WebScipio - eukaryotic gene identification
diArk: Spermophilus tridecemlineatus organism-specific diArk - a resource for eukaryotic genome research
Wikipedia taxonomy/phylogenetic iPhylo
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.


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