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Taxonomy browser (Lactuca sativa)

Lactuca sativa

Taxonomy ID: 4236 (for references in articles please use NCBI:txid4236)
Scientific name: Lactuca sativa L.
Inherited blast name: eudicots
Rank: species
Genetic code: Translation table 1 (Standard)
Mitochondrial genetic code: Translation table 1 (Standard)
Plastid genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
common name: cultivated lettuce
common name: garden lettuce
Lineage( full )
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Cichorioideae; Cichorieae; Lactucinae; Lactuca
   Entrez records   
Database name Subtree links Direct links
Nucleotide 129,035 129,028
Nucleotide EST 81,330 81,330
Nucleotide GSS 7 7
Protein 85,177 85,172
Genome 1 1
Popset 274 274
GEO Datasets 105 105
UniGene 45,536 45,536
PubMed Central 1,580 1,580
Gene 46,235 46,235
SRA Experiments 959 938
Protein Clusters 79 79
Identical Protein Groups 60,819 60,816
Bio Project 36 33
Bio Sample 910 890
Assembly 4 4
Clone DB 1 1
Probe 178 178
PubChem BioAssay 197 197
Taxonomy 5 1

Comments and References:

Nota BeneGRIN (Jul 28, 2011)
Name verified on 28 July 2011 in: USDA, ARS, National Genetic Resources Program. Germplasm Resources Information Network - (GRIN) [Online Database]. National Germplasm Resources Laboratory, Beltsville, Maryland.

Nota BeneFlora of China - Asteraceae
Zhu Shi et al. Asteraceae (Compositae). Pp. 1-894 in: Wu, Z. Y., Raven, P. H. & Hong, D. Y., eds., Flora of China Volume 20-21 (Asteraceae). Science Press (Beijing) & Missouri Botanical Garden Press (St. Louis). Online version.

Nota BeneEuro+Med Plantbase
Name verified on date of entry into database in: The Euro+Med Plantbase - the information resource for Euro-Mediterranean plant diversity. W. Greuter (Ed.) Botanic Garden and Botanical Museum Berlin-Dahlem.


Genome Information

Go to NCBI genomic BLAST page for Lactuca sativa
   Trace records (raw single-pass reads of DNA sequence)   
Sequencing Center Name
Record counts per type
EST ALL
GBSF_UCD - Genome and Biomedical Sciences Facility, University of California, Davis
80,177 80,177
Totals per type
80,177 80,177

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Lactuca sativa taxonomy taxonomy/phylogenetic Arctos Specimen Database
Lactuca sativa L. taxonomy/phylogenetic Encyclopedia of life
2 records from this provider organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Lactuca sativa L. taxonomy/phylogenetic Integrated Taxonomic Information System
Lactuca sativa taxonomy/phylogenetic PLANTS Database (USDA/NRCS)
Lactuca sativa taxonomy/phylogenetic The International Plant Names Index
Lactuca sativa L. taxonomy/phylogenetic USDA-ARS GRIN Taxonomy
search W3TROPICOS taxonomy/phylogenetic Vascular Tropicos
2 records from this provider organism-specific WebScipio - eukaryotic gene identification
3 records from this provider organism-specific diArk - a resource for eukaryotic genome research
Lactuca sativa taxonomy/phylogenetic electronic Plant Information Centre
Wikipedia taxonomy/phylogenetic iPhylo
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

Show organism modifiers



Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.


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