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Taxonomy browser ([Clostridium] scindens ATCC 35704)

[Clostridium] scindens ATCC 35704 1)

Taxonomy ID: 411468 (for references in articles please use NCBI:txid411468)
Scientific name: Clostridium scindens ATCC 35704
NCBI BLAST® name: firmicutes
Rank: no rank
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Bacteria; Terrabacteria group; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoclostridium; [Clostridium] scindens
   Entrez records   
Database name Direct links
Nucleotide 155
Protein 11,312
Structure 2
Genome 1
GEO Datasets 19
PubMed Central 1
SRA Experiments 7
Identical Protein Groups 5,097
Bio Project 3
Bio Sample 2
Assembly 2
Taxonomy 1

Notes:

Comments and References:

genome sequence
Determination of the DNA genome sequence of this strain has been or is being determined either in whole or in part.

Reference to PubMed documentDevendran S et al. (2019)
Devendran, S., Shrestha, R., Alves, J.M.P., Wolf, P.G., Ly, L., Hernandez, A.G., Méndez-García, C., Inboden, A., Wiley, J., Paul, O., Allen, A., Springer, E., Wright, C.L., Fields, C.J., Daniel, S.L., and Ridlon, J.M. "Clostridium scindens ATCC 35704: integration of nutritional requirements, the complete genome sequence, and global transcriptional responses to bile acids." Appl. Environ. Microbiol. (2019) 85:e00052-19.


Genome Information

   Trace records (raw single-pass reads of DNA sequence)   
Sequencing Center Name
Record counts per type
WGS ALL
WUGSC - Washington University, Genome Sequencing Center
31,626 31,626
Totals per type
31,626 31,626

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Clostridium scindens meta-databases BacDive
2 records from this provider organism-specific BioCyc
GOLD: Go0000897 organism-specific Genomes On Line Database
641736197: Lachnoclostridium scindens ATCC 35704 organism-specific Integrated Microbial Genomes
Notes:
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A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.


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