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Taxonomy browser (Solanum tuberosum)

Solanum tuberosum

Taxonomy ID: 4113 (for references in articles please use NCBI:txid4113)
current name
Solanum tuberosum L.
includes:
Solanum tuberosum subsp. tuberosum
Genbank common name: potato
NCBI BLAST name: eudicots
Rank: species
Genetic code: Translation table 1 (Standard)
Mitochondrial genetic code: Translation table 1 (Standard)
Plastid genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
common name(s) potatoes
Lineage( full )
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliopsida; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
   Entrez records   
Database name Subtree links Direct links
Nucleotide 475,350 475,038
Protein 45,713 45,363
Structure 56 56
Genome 1 1
Popset 276 276
GEO Datasets 2,256 2,231
PubMed Central 7,429 7,427
Gene 35,281 35,146
SRA Experiments 6,534 6,508
GEO Profiles 32,448 32,448
Protein Clusters 80 80
Identical Protein Groups 35,912 35,840
Bio Project 275 270
Bio Sample 8,534 8,507
Bio Systems 262 262
Assembly 12 10
Probe 646 646
PubChem BioAssay 45 45
Taxonomy 2 1

Comments and References:

GRIN (Sept 02, 2010)
Name verified on 2 September 2010 in: USDA, ARS, National Genetic Resources Program. Germplasm Resources Information Network - (GRIN) [Online Database]. National Germplasm Resources Laboratory, Beltsville, Maryland.
Flora of China - Solanaceae
Zhi-Yun Zhang, Anmin Lu & William G. D'Arcy. Solanaceae A. L. Jussieu. In Wu, Z. Y. & P. H. Raven, eds. 1994. Flora of China. Vol. 17 (Verbenaceae through Solanaceae). Science Press, Beijing, and Missouri Botanical Garden Press, St. Louis. 342 pp.
Linnaean Plant Names
The Linnaean Plant Name Typification Project. 2004. The Natural History Museum, Cromwell Rd., London, SW7 5BD, UK.
Nee M 1999
Nee M. 1999. Synopsis of Solanum in the New World. In Nee M, Symon DE, Lester RN, and Jessop JP (Eds.). Solanaceae IV: Advances in Biology and Utilization. The Royal Botanic Gardens, Kew, pp. 285-333.

Genome Information

Go to NCBI genomic BLAST page for Solanum tuberosum
Genome view: 13 chromosomes
Names 1 2 3 4 5 6 7 8 9 10 11 12 Pltd

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
2 records from this provider supplemental materials Dryad Digital Repository
Solanum tuberosum L. taxonomy/phylogenetic Encyclopedia of life
3 records from this provider organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Related Immune Epitope Information gene/protein/disease-specific Immune Epitope Database and Analysis Resource
2507525040: Solanum tuberosum DM 1-3 516 R44 organism-specific Integrated Microbial Genomes
Solanum tuberosum L. taxonomy/phylogenetic Integrated Taxonomic Information System
Solanum tuberosum taxonomy/phylogenetic Lifemap
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Solanum tuberosum taxonomy/phylogenetic PLANTS Database (USDA/NRCS)
potato nematodes taxonomy/phylogenetic Plant and Insect Parasitic Nematodes
Solanum tuberosum taxonomy/phylogenetic Plants of the World Online
Solanum tuberosum taxonomy/phylogenetic The International Plant Names Index
Solanum tuberosum taxonomy/phylogenetic TreeBase
2 records from this provider taxonomy/phylogenetic USDA-ARS GRIN Taxonomy
search W3TROPICOS taxonomy/phylogenetic Vascular Tropicos
WebScipio: Solanum tuberosum organism-specific WebScipio - eukaryotic gene identification
diArk: Solanum tuberosum organism-specific diArk - a resource for eukaryotic genome research
Wikipedia taxonomy/phylogenetic iPhylo
Notes:
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A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.


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