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Entrez PubMed Nucleotide Protein Genome Structure PMC Taxonomy BioCollections
   
   Entrez records   
Database name Direct links Subtree links Links from type
BioProject 2,010 2,020 -
BioSample 38,316 38,623 -
GEO DataSets 7,466 7,493 -
Gene 50,322 50,322 -
Identical Protein Groups 38,464 38,511 -
Nucleotide 809,989 812,536 -
PubChem BioAssay 244 244 -
PMC 25,972 25,972 -
Protein 55,634 55,868 -
SRA 38,631 39,139 -
Structure 117 117 -
Taxonomy 2 2 -

Solanum lycopersicum

Taxonomy ID: 4081 (for references in articles please use NCBI:txid4081)
current name
Solanum lycopersicum  L., 1753
Genbank common name: tomato
NCBI BLAST name: eudicots
Rank: species
Genetic code: Translation table 1 (Standard)
Mitochondrial genetic code: Translation table 1 (Standard)
Other names:
heterotypic synonym Lycopersicon esculentum var. esculentum
heterotypic synonym Solanum esculentum  Dunal
heterotypic synonym Solanum lycopersicum var. humboldtii
heterotypic synonym Lycopersicon esculentum  Mill.
Lineage(full)
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliopsida; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Solanum subgen. Lycopersicon

Comments and References:

image:Solanum lycopersicum
Image by Softeis from Wikimedia Commons under a CC BY-SA 3.0 license.
* Image may not have been verified for accuracy by NCBI Taxonomy.
Bohs L & Olmstead RG 1997
Bohs L and Olmstead RG. 1997. Phylogeny of Solanum (Solanaceae) subgenera based on ndhF sequence data. Systematic Botany 22 (1): 5-17.
Spooner DM et al. 1993
Spooner DM, Anderson GJ, Jansen RK. 1993. Chloroplast DNA evidence for the interrelationships of tomatoes, potatoes, and pepinos (Solanaceae). Amer. J. Botany 80 (6): 676-688.
Peralta, Knapp & Spooner (unpubl.)
Peralta, Knapp & Spooner, unpublished monograph, In: Solanaceae Genome Project Genomics Network, Cornell University - Solanum nomenclature.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Lycopersicon esculentum taxonomy taxonomy/phylogenetic Arctos Specimen Database
Solanum lycopersicum taxonomy taxonomy/phylogenetic Arctos Specimen Database
Lycopersicon esculentum taxonomy/phylogenetic CalPhotos
dryaddb supplemental materials Dryad Digital Repository
dryaddb supplemental materials Dryad Digital Repository
dryaddb supplemental materials Dryad Digital Repository
dryaddb supplemental materials Dryad Digital Repository
dryaddb supplemental materials Dryad Digital Repository
dryaddb supplemental materials Dryad Digital Repository
dryaddb supplemental materials Dryad Digital Repository
dryaddb supplemental materials Dryad Digital Repository
Solanum lycopersicum L. taxonomy/phylogenetic Encyclopedia of life
GOLD: 129 Organisms organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Lycopersicon esculentum var. esculentum P. Mill. taxonomy/phylogenetic Integrated Taxonomic Information System
Solanum lycopersicum L. taxonomy/phylogenetic Integrated Taxonomic Information System
Solanum lycopersicum taxonomy/phylogenetic Lifemap
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Solanum lycopersicum taxonomy/phylogenetic PLANTS Database (USDA/NRCS)
Solanum lycopersicum (L.) herbarium/museum collections PlantaeDB, University of Bucharest
Solanum esculentum taxonomy/phylogenetic Plants of the World Online
Lycopersicon lycopersicum taxonomy/phylogenetic Plants of the World Online
Lycopersicum esculentum taxonomy/phylogenetic Plants of the World Online
Lycopersicon esculentum taxonomy/phylogenetic Plants of the World Online
Solanum lycopersicum taxonomy/phylogenetic Plants of the World Online
Lycopersicon lycopersicum taxonomy/phylogenetic The International Plant Names Index
Lycopersicum esculentum taxonomy/phylogenetic The International Plant Names Index
Solanum lycopersicum taxonomy/phylogenetic The International Plant Names Index
Lycopersicon esculentum taxonomy/phylogenetic The International Plant Names Index
Lycopersicon esculentum var. esculentum taxonomy/phylogenetic USDA-ARS GRIN Taxonomy
Lycopersicon lycopersicum L. taxonomy/phylogenetic USDA-ARS GRIN Taxonomy
Lycopersicon lycopersicum (L.) H. Karst. taxonomy/phylogenetic USDA-ARS GRIN Taxonomy
Lycopersicon esculentum Mill. taxonomy/phylogenetic USDA-ARS GRIN Taxonomy
search W3TROPICOS taxonomy/phylogenetic Vascular Tropicos
WebScipio: Lycopersicon esculentum organism-specific WebScipio - eukaryotic gene identification
diArk: Lycopersicon esculentum str. Heinz 1706 organism-specific diArk - a resource for eukaryotic genome research
diArk: Lycopersicon esculentum organism-specific diArk - a resource for eukaryotic genome research
diArk: Lycopersicon esculentum M82 organism-specific diArk - a resource for eukaryotic genome research
Wikipedia taxonomy/phylogenetic iPhylo
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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