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Taxonomy browser (Daucus carota)

Daucus carota

Taxonomy ID: 4039 (for references in articles please use NCBI:txid4039)
current name
Daucus carota L., 1753
Genbank common name: carrot
NCBI BLAST name: eudicots
Rank: species
Genetic code: Translation table 1 (Standard)
Mitochondrial genetic code: Translation table 1 (Standard)
Plastid genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
common name(s) Queen Anne's lace, carrots
Lineage( full )
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliopsida; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus; Daucus sect. Daucus
   Entrez records   
Database name Subtree links Direct links
Nucleotide 88,928 2,010
Protein 121,831 34,697
Structure 9 8
GEO Datasets 75 71
PubMed Central 4,181 4,180
Gene 42,798 139
SRA Experiments 1,777 1,326
Protein Clusters 78 78
Identical Protein Groups 82,790 33,547
BioProject 67 39
BioSample 1,635 1,042
Datasets Genome 4 2
PubChem BioAssay 52 52
Taxonomy 16 1

Comments and References:

image:Daucus carota
Image by Alvesgaspar from Wikimedia Commons under a CC BY-SA license.
* Image may not have been verified for accuracy by NCBI Taxonomy.
GRIN (Mar 20, 2008)
Name verified on 20 March 2008 in: USDA, ARS, National Genetic Resources Program. Germplasm Resources Information Network - (GRIN) [Online Database]. National Germplasm Resources Laboratory, Beltsville, Maryland.
African Plant Database (Apr 08, 2015)
Name accessed on 8 April 2015 in: African Flowering Plants Database (version 3.1). Conservatoire et Jardin botaniques de la Villle de Geneve and South African National Biodiversity Institute, Pretoria, retrieved from http://www.ville-ge.ch/musinfo/bd/cjb/afri
Banasiak L et al. 2016, doi:10.12705/653.8
Banasiak L, Wojewodzka A, Baczynski J, Reduron J-P, Piwczynski, M Kurzyna-Mlynik R, Gutaker R, Czarnocka-Cieciura A, Kosmala-Grzechnik S and Spalik K. 2016. Phylogeny of Apiaceae subtribe Daucinae and the taxonomic delineation of its genera. Taxon 65(3): 563-585. DOI: http://dx.doi.org/10.12705/653.8

Genome Information

Go to NCBI genomic BLAST page for Daucus carota
Genome view: 10 chromosomes
Names A B C D E F G H I Pltd

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Daucus carota taxonomy taxonomy/phylogenetic Arctos Specimen Database
Daucus carota images images Bioimages.vanderbilt.edu
Daucus carota taxonomy/phylogenetic CalPhotos
Daucus carota L. taxonomy/phylogenetic Encyclopedia of life
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Related Immune Epitope Information gene/protein/disease-specific Immune Epitope Database and Analysis Resource
Daucus carota L. taxonomy/phylogenetic Integrated Taxonomic Information System
Daucus carota taxonomy/phylogenetic PLANTS Database (USDA/NRCS)
Daucus carota (L.) herbarium/museum collections PlantaeDB, University of Bucharest
Daucus carota taxonomy/phylogenetic Plants of the World Online
Daucus carota taxonomy/phylogenetic The International Plant Names Index
Daucus carota L. taxonomy/phylogenetic USDA-ARS GRIN Taxonomy
search W3TROPICOS taxonomy/phylogenetic Vascular Tropicos
WebScipio: Daucus carota organism-specific WebScipio - eukaryotic gene identification
Daucus carota Linnaeus taxonomy/phylogenetic World Register of Marine Species
diArk: Daucus carota organism-specific diArk - a resource for eukaryotic genome research
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

Organism modifiers

To hide organism modifiers click here
strain
10 [1 1] 2566B [1] 493N [1 1] 493S [1 1]
AUTUMN KING cultivar Autumn King [3 3] B4367rs [3] Danver Half-long cultivar Danvers Half Long [38 1 13] Danvers cultivar Danvers [6 6 2]
Danvers half-long cultivar Danvers half-long Denver half-long cultivar Danvers half-long Flakkese SG766 Trophy cultivar Flakkese SG766 Trophy [2 2] Imperator cultivar Imperator [1 1]
Juwarot, Queen Anne's Lace cultivar Juwarot [1 2 2 1] Koizumi-risou-gosun cultivar Koizumi-risou-gosun [1 1] Kurodagosun cultivar Kurodagosun [5 49 2 31 12] Lunga di Amsterdam cultivar Lunga di Amsterdam [10 9]
Nagafutori-Kintoki cultivar Nagafutori-Kintoki [1] Namtaise cultivar Nantaise [1 5 21 22 11] Qeen Anne's Lace common Queen Anne's lace [18 8] Queen Anne's Lace common Queen Anne's lace [18 8]
US Harumakigosun cultivar US harumakigosun [44 41] US-Harumakigosun cultivar US-Harumakigosun [44 41] cv. Kurodagosun cultivar Kurodagosun [5 49 2 31 12] sg766 trophy [4 4]
ssp. wild type biotype wild type [3 3] var. Danvers cultivar Danvers [6 6 2] variety Danver cultivar Danvers [6 6 2] wild type [1]
variety
3180C cultivar 3180C [3 3] Juwarot cultivar Juwarot [1 2 2 1]
cultivar
(QALxB493) F2 [5] 0493B [1 34] 3180C [3 3] 6274 [1]
Autumn King [3 3] B493 [36 23] B5280 [1 1] Beita [2 2 1]
BenHongJinShi [3 2 2] Black Carrot [1 1 1] Brasilia [1 1 1 1] Chantenay Red Cored [2 2 2]
Cosmic Purple [2 3 3 2] Danver Half-long cultivar Danvers Half Long [38 1 13] Danvers [6 6 2] Danvers Half Long [38 1 13]
Danvers half-long cultivar Danvers Half Long [38 1 13] Daucus carota [1] Dayumeirenzhi [2 2 1] Deep Purple [3 3 3 2]
Flakkese SG766 Trophy [2 2] HCM [1 1] Harumaki Gosun [7 7] Harumakigosun [5 5]
Hongyubahao [2 2 1] Hypo2 [1] Imperator [1 1] Juwarot [1 2 2 1]
K826A [6 11] K831B [6 9] Kintoki [1 19 19 1] Kintoki Gold [1 1]
Koizumi-risou-gosun [1 1] Koushingosun [6 6] Kuroda [2 4 63 11 9 5] Kurodagosun [5 49 2 31 12]
Lange rote stumpfe 1 [6 3 6] Lunga di Amsterdam [10 9] MS Yonsun [9 9] Malaysian [1 1]
Meiguihong [2 2 1] Nagafutori-Kintoki [1] Namtaise cultivar Nantaise [1 5 21 22 11] Nantaise [1 5 21 22 11]
Nantes [15 2 2 60] Nantes_normu [4 3 4] Nevis [9 4 9] Newmarket F1 [1 1]
Purple Black Carrot [2 2] Purple Haze [6 5 3 2] QAL [1 59] Qitouhuang [1 14 3]
Queen Anne's Lace common Queen Anne's lace [18 8] Red Cored Chantenay [3 3] Rodelika [7 7] Rotin [1 28 4 25 1]
S.Valery [2 1] Saint Valery [1] Sanhongliucun [3 3 2] Senta [5 3 5]
St. Valery [1 8 8] T29 [1 1] Tokinashigosun [2 2] Trophy [1 1]
US harumakigosun [44 41] US-Harumakigosun [44 41] Valery [1] W259A [4 10]
Wild type [1 1 1] fertile inbred line [2 2] half long [2 170] petaloid CMS line [2 3]
vitarich [1 2]
biotype
wild type [3 3]
isolate
+806 [2 2 2] 1002 [1 1] 1002b [1 1 1] 1003 [1 1]
1003a [1 1 1] 1003b [1 1 1] 1004 [1 1] 1004a [1 1 1]
1004b [1 1 1] 1005 [1 1] 1005a [1 1 1] 1005c [1 1 1]
1006 [1 1] 1006c [1 1 1] 1006d [1 1 1] 101b [1 1 1]
102 [1 2] 102a [1 1 1] 102b [1 1 1] 103 [1 1]
1037968 [1] 103a [1 1 1] 103c [1 1 1] 104 [1 1]
104a [1 1 1] 104b [1 1 1] 105a [1 1 1] 107 [1 2]
1101 [1 1] 1101a [1 1 1] 1101c [1 1 1] 1102 [1 1]
1102b [1 1 1] 1102e [1 1 1] 1104a [1 1 1] 1104e [1 1 1]
1105d [1 1 1] 1106 [1 1] 1106a [1 1 1] 1107c [1 1 1]
1107d [1 1 1] 1108 [1 1] 1108d [1 1 1] 1201 [1 1]
1201b [1 1 1] 1201d [1 1 1] 1202a [1 1 1] 1204 [1 1]
1204a [1 1 1] 1204c [1 1 1] 1205c [1 1 1] 1206 [1 1]
1206a [1 1 1] 1206b [1 1 1] 1207 [1 1] 1301 [1 1]
1301e [1 1 1] 1301f [1 1 1] 1302 [1 1] 1302a [1 1 1]
1302b [1 1 1] 1303d [1 1 1] 1304a [1 1 1] 1304e [1 1 1]
1305 [1 1] 1305a [1 1 1] 1305b [1 1 1] 1306 [1 1]
1306b [1 1 1] 1401 [1 1] 1401a [1 1 1] 1401c [1 1 1]
1402 [1 1] 1402b [1 1 1] 1402c [1 1 1] 1403c [1 1 1]
1403e [1 1 1] 1405 [1 1] 1405a [1 1 1] 1405b [1 1 1]
1406 [1 1] 1406a [1 1 1] 1406c [1 1 1] 301a [1 1 1]
301c [1 1 1] 302b [1 1 1] 302c [1 1 1] 303 [1 1]
303a [1 1 1] 303c [1 1 1] 304 [1 2] 304c [1 1 1]
305a [1 1 1] 305b [1 1 1] 306A [1 1 1] 307 [1 1]
401a [1 1 1] 401b [1 1 1] 402c [1 1 1] 404 [1 1]
404c [1 1 1] 404e [1 1 1] 406 [1 2] 406b [1 1 1]
407 [1 1] 407a [1 1 1] 493-A [1] 493-D [1]
501 [1 1] 501a [1 1 1] 501c [1 1 1] 502 [1 2]
502b [1 1 1] 503 [1 1] 503a [1 1 1] 503b [1 1 1]
504 [1 1 1 1] 504b [1 1 1] 504c [1 1 1] 505 [1 1]
505a [1 1 1] 505b [1 1 1] 602 [1 2] 604 [1 2]
604a [1 1 1] 604c [1 1 1] 605 [1 1] 605b [1 1 1]
606b [1 1 1] 606c [1 1 1] 607 [1 2] 607c [1 1 1]
607d [1 1 1] 701 [1 2] 701a [1 1 1] 701c [1 1 1]
702 [1 1] 702a [1 1 1] 702c [1 1 1] 704 [1 1]
704e [1 1 1] 705 [1 1] 705b [1 1 1] 705d [1 1 1]
706 [1 1] 706a [1 1 1] 706b [1 1 1] 801c [1 1 1]
802 [1 1] 802b [1 1 1] 802c [1 1 1] 803a [1 1 1]
804 [1 2] 804C [1 1 1] 805 [1 1] 805C [1 1 1]
805b [1 1 1] 807 [1 1] 807a [1 1 1] 807b [1 1 1]
808 [1 2] 808a [1 1 1] 901 [1 2] 901a [1 1 1]
901b [1 1 1] 902 [1 1] 902a [1 1 1] 902b [1 1 1]
903d [1 1 1] 904 [1 1] 904a [1 1 1] 904b [1 1 1]
905 [1 2] 905A [1 1 1] 905B [1 1 1] 907E [1 1 1]
908 [1 1] 908b [1 1 1] 908c [1 1 1] BC-Niyaz-1 [1 1]
BC-Niyaz-2 [1 1] BC-Niyaz-3 [1 1] C1 [1 1] D.carota [1]
DACA_1782 [1 2] DH13M14 [1 19 33207 19] DNAS-5E8-A4H8 [1 1] DNAS-5EC-A4HD [1 1]
DNAS-5F4-A4HM [1 1] Dau_car [1 1] ECMCcar16 [1] F2-A [1]
F2-B [1] F2-C [1] F2-E [1] F2-F [1]
HFQC [3 3 2] HIMS2264-12 [1 1 1] KRD [5 3 4] Kuroda [1 9 5]
LS121 [1] LegMedMO_2 [1 1 1] LegMedMO_66 [1 1 1] NHMDADTemp27732 [4 1]
NMW261 [2 2] NMW4083 [1 1] NMW4084 [2 2] NMW6363 [2 2]
POR2a [1 1] POR2b [1 1] POR2c [1 1] QAL-A [1]
QAL-B [1] QAL-C [1] QAL-E [1] QAL-F [1]
QAL-G [1] QAL-H [1] QTH [3 3 2] TLF-044 [1]
W001C [2 2] WD966403 [1 1] WD966406 [1 1] YSP [6 3 4]
YSW [3 3 2] assem21.0.2 [2 2] p13 [2 2]
common
Queen Anne's Lace [18 8] Queen Anne's lace [18 8]
sub-species
Namtaise cultivar Nantaise [1 5 21 22 11] Nantaise cultivar Nantaise [1 5 21 22 11] Queen Anne's lace common Queen Anne's lace [18 8] US-Harumakigosun cultivar US-Harumakigosun [44 41]
specimen-voucher
04142023 [1] 34005 [1] 65230373 [1] 654025120904005 [1]
654028120725009 [1] 95553HIM [2 1] AP198 [3 2] AP198WP [2 1]
Ames 26381 [1 56 10 115] Ames 26393 [9 9 1] Ames 31193 [9 9 1] Ames 31194 [1 57 10 115]
Ames 7674 [9 9] Andersson 2360 (GB) [1 1] BIOUG24048-C01 [2 1] BM 2008/305 [2 2 2]
CKPL-2017-144 [1] DC2022 [1] Dc [1] EDNA20-0060165 [1]
G00199092 [2 2] HERB0029 [2 2] JAG 0091WP [1 1] JAG 0616 [2 2]
JAG 0711 [2 2] Jury, S.L. 17848 (RNG) [1 1] Jury, SL. 17848 [1] MISU26-39 [1 1]
MMD 038 [2 2] M_July1_S38_HB_F1 [1] MoSEL-271 [1 1] NHMDADTemp27732 [6 3]
P.M. McNutt 005 (FLDCI) [1 1] PI 279759 [9 9 1] PI 279762 [9 9 1] PI 279775 [9 9 1]
PI 279777 [8 8 1] PI 295862 [9 9 1] PS1225MT01 [3 1] PS1225MT02 [5 3]
Piwczynski & Puchalka KEIB_AP_00347 [3 2 1] Q261 [3 3 2] QRI 010 [1 1 1] QRI 014 [1 1 1]
QRI-082523 [1] RBG 171WP [2 1] S.L. Jury 17848 (RNG) [1 1] SCSB-HNJ-0417 [3 3 2]
TJD-273 [2 2] TLF-044 [2 2 2] USDA line B2566B [9 9 1] WAB_0132469319 [2 2]
WAB_0132469320 [1 1] WAB_0132469397 [2 2] v0012701WIS (Wisconsin State Herbarium) [1 1] v0260366WIS [2 2]
wj35 [1]
breed
Kintoki cultivar Kintoki [1 19 19 1]
bio-material
Alkemist_Lot_UR29409CRB [4] R1CP2010_variant1 [1 1]

Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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