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Taxonomy browser (Amphimedon queenslandica)

Amphimedon queenslandica

Taxonomy ID: 400682 (for references in articles please use NCBI:txid400682)
Scientific name: Amphimedon queenslandica Hooper & Van Soest, 2006
Inherited blast name: sponges
Rank: species
Genetic code: Translation table 1 (Standard)
Mitochondrial genetic code: Translation table 4 (Mold Mitochondrial; Protozoan Mitochondrial; Coelenterate Mitochondrial; Mycoplasma; Spiroplasma)
Other names:
includes: Reniera sp. JGI-2005
Lineage( abbreviated )
Eukaryota; Metazoa; Porifera; Demospongiae; Heteroscleromorpha; Haplosclerida; Niphatidae; Amphimedon
   Entrez records   
Database name Direct links
Nucleotide 51,044
Nucleotide EST 63,542
Protein 24,205
Genome 1
Popset 3
GEO Datasets 236
UniGene 6,211
PubMed Central 629
Gene 29,777
SRA Experiments 321
Protein Clusters 8
Bio Project 12
Bio Sample 305
Bio Systems 234
Assembly 1
Probe 51
Taxonomy 1

Comments and References:

Nota BeneHooper & Van Soest (2006)
Hooper,J.N.A. and Van Soest,R.W.M. (2006) "A new species of Amphimedon (Porifera, Desmospongiae, Haplosclerida, Niphatidae) from the Capricorn-Bunker Group of Islands, Great Barrier Reef, Australia: target species for the 'sponge genome project'" Zootaxa 1314: 31-39 [Amphimedon queenslandica sp. nov.]


Genome Information

Go to NCBI genomic BLAST page for Amphimedon queenslandica
   Trace records (raw single-pass reads of DNA sequence)   
Sequencing Center Name
Record counts per type
EST WGS ALL
JGI - Joint Genome Institute, U.S. Department of Energy
83,040 2,834,852 2,917,892
Totals per type
83,040 2,834,852 2,917,892

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Amphimedon queenslandica Hooper & van Soest, 2006 taxonomy/phylogenetic Encyclopedia of life
GOLD: Go0000151 organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
2507525020: Amphimedon queenslandica organism-specific Integrated Microbial Genomes
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
plazi taxonomy/phylogenetic Plazi
WebScipio: Amphimedon queenslandica organism-specific WebScipio - eukaryotic gene identification
Amphimedon queenslandica Hooper & van Soest, 2006 taxonomy/phylogenetic World Register of Marine Species
diArk: Amphimedon queenslandica organism-specific diArk - a resource for eukaryotic genome research
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.


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