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   Entrez records   
Database name Direct links Subtree links Links from type
BioProject 118 172 -
BioSample 1,646 1,820 -
Gene 19,223 60,831 -
Identical Protein Groups 882,518 991,887 -
Nucleotide 40,938 65,710 501
PubChem BioAssay 10 10 -
PMC 3,364 3,364 -
Protein 1,536,675 2,104,093 -
SRA 964 1,061 -
Structure 5 14 -
Taxonomy 36 36 -

Rhizobium leguminosarum

Taxonomy ID: 384 (for references in articles please use ncbitaxon:384)
current name
Rhizobium leguminosarum  (Frank 1879) Frank 1889 (Approved Lists 1980) emend. Ramirez-Bahena et al. 2008
type strain of Rhizobium leguminosarum: personal : 3Hoq18 , ATCC : 10004 , BCCM/LMG : 14904 , USDA : 2370 , DSM : 106839
homotypic synonym:
"Rhizobacterium leguminosarum"  (Frank 1879) Kirchner 1896 , effective name  1)
"Schinzia leguminosarum"  Frank 1879 , effective name  2)
"Phytomyxa leguminosarum"  (Frank 1879) Schroeter 1886 , effective name  3)
NCBI BLAST name: a-proteobacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
heterotypic synonym Rhizobium trifolii  Dangeard 1926 (Approved Lists 1980)
type strain of Rhizobium trifolii: ATCC : 14480 , DSM : 30141 , personal : 3D1k22a
heterotypic synonym "Bacillus francki"  Matzuschita 1902 , effective name  4)
Lineage(full)
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium

Notes:

Comments and References:

Crow VL et al. (1981)
Crow, V.L., Jarvis, B.D.W., and Greenwood, R.M. "Deoxyribonucleic acid homologies among acid-producing strains of Rhizobium." Int. J. Syst. Bacteriol. (1981) 31:152-172. [No PubMed record available.]
Frank B (1879)
Frank, B. "Uber die Parasiten in den Wurzelanschwillungen der Papilionaceen." Botanische Zeitung (1879) 37:376-387,394-399. [No PubMed record available.]
Jarvis BDW et al. (1980)
Jarvis, B.D.W., Dick, A.G., and Greenwood, R.M. "Deoxyribonucleic acid homology among strains of Rhizobium trifolii and related species." Int. J. Syst. Bacteriol. (1980) 30:42-52. [No PubMed record available.]
Kirchner O (1896)
Kirchner, O. "Die Wurzelknollchen der Sojabohne." Beitr. Biol. Pflanz. (1896) 7:213-224. [No PubMed record available.]
Matzuschita T (1902)
Matzuschita, T. Bacteriologische Diagnostik. (1902) Gustav Fisher, Jena. [No PubMed record available.]
Menéndez E et al. (2024)
Menéndez, E., Flores-Félix, J.D., Kaur, S., diCenzo, G.C., Young, J.P.W., Peix, A., and Velázquez, E. "Reclassification of type strains of Rhizobium indigoferae and Sinorhizobium kummerowiae into the species Rhizobium leguminosarum and Sinorhizobium meliloti, respectively." Int. J. Syst. Evol. Microbiol. (2024) 74(7):006451.
Ramirez-Bahena MH et al. (2008)
Ramirez-Bahena, M.H., Garcia-Fraile, P., Peix, A., Valverde, A., Rivas, R., Igual, J.M., Mateos, P.F., Martinez-Molina, E., and Velazquez, E. "Revision of the taxonomic status of the species Rhizobium leguminosarum (Frank 1879) Frank 1889AL, Rhizobium phaseoli Dangeard 1926AL and Rhizobium trifolii Dangeard 1926AL. R. trifolii is a later synonym of R. leguminosarum. Reclassification of the strain R. leguminosarum DSM 30132 (=NCIMB 11478) as Rhizobium pisi sp. nov." Int. J. Syst. Evol. Microbiol. (2008) 58:2484-2490.
Schroeter J (1886)
Schroeter, J. "1885-1889." In: F. Cohn, Kryptogamenflora von Schlesien. Bd.3, Heft 3, Pilze J.U. Kern's Verlag, Breslau, pp. 1-814. [No PubMed record available.]
Skerman VBD et al. (1980)
Skerman, V.B.D., McGowan, V., and Sneath, P.H.A. (editors). "Approved lists of bacterial names." Int. J. Syst. Bacteriol. (1980) 30(1):225-420. [No PubMed record available.]
Skerman VBD et al. (1980) (Rhizobium trifolii)
Skerman, V.B.D., McGowan, V., and Sneath, P.H.A. (editors): "Approved lists of bacterial names." Int. J. Syst. Bacteriol. (1980) 30:225-420. [No PubMed record available.]
Young JM (1999)
Young, J.M. "Correction to the authority of Rhizobium leguminosarum." Int. J. Syst. Bacteriol. (1999) 49:1943. [No PubMed record available.]

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Rhizobium leguminosarum type strain (BD-ID 136926) meta-databases BacDive
Rhizobium leguminosarum type strain (BD-ID 138443) meta-databases BacDive
Rhizobium leguminosarum (Frank 1879) Frank 1889 (Approved Lists 1980) taxonomy/phylogenetic Encyclopedia of life
GOLD: 229 Organisms organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Rhizobium leguminosarum culture/stock collections Global Catalogue of Microorganisms
Related Immune Epitope Information gene/protein/disease-specific Immune Epitope Database and Analysis Resource
Phytomyxa leguminosarum (A.B. Frank) J. Schrot. taxonomy/phylogenetic Index Fungorum
Schinzia leguminosarum A.B. Frank taxonomy/phylogenetic Index Fungorum
8024479707: Rhizobium leguminosarum Tri-43 organism-specific Integrated Microbial Genomes
2842229732: Rhizobium leguminosarum SEMIA 481 organism-specific Integrated Microbial Genomes
2842237096: Rhizobium leguminosarum SEMIA 482 organism-specific Integrated Microbial Genomes
2859840839: Rhizobium leguminosarum ATCC 14479 organism-specific Integrated Microbial Genomes
2842304105: Rhizobium leguminosarum SEMIA 499 organism-specific Integrated Microbial Genomes
2842341865: Rhizobium leguminosarum SEMIA 4011 organism-specific Integrated Microbial Genomes
2838694306: Rhizobium leguminosarum SEMIA 421 organism-specific Integrated Microbial Genomes
2842384541: Rhizobium leguminosarum SEMIA 4025 organism-specific Integrated Microbial Genomes
2838686498: Rhizobium leguminosarum SEMIA 416 organism-specific Integrated Microbial Genomes
2850814604: Rhizobium leguminosarum Norway organism-specific Integrated Microbial Genomes
2842077413: Rhizobium leguminosarum SEMIA 422 organism-specific Integrated Microbial Genomes
2842271015: Rhizobium leguminosarum SEMIA 488 organism-specific Integrated Microbial Genomes
2953717477: Rhizobium leguminosarum USDA 321 organism-specific Integrated Microbial Genomes
2918438226: Rhizobium leguminosarum bv. trifolii USDA 7018 organism-specific Integrated Microbial Genomes
8023680758: Rhizobium leguminosarum SARCC-132 organism-specific Integrated Microbial Genomes
2918430697: Rhizobium leguminosarum USDA 2677 organism-specific Integrated Microbial Genomes
8085367298: Rhizobium leguminosarum BT01 organism-specific Integrated Microbial Genomes
2933570622: Rhizobium leguminosarum SEMIA 409 organism-specific Integrated Microbial Genomes
2935901341: Rhizobium leguminosarum SEMIA 4082 organism-specific Integrated Microbial Genomes
2919283621: Rhizobium leguminosarum BE95 organism-specific Integrated Microbial Genomes
2935894831: Rhizobium leguminosarum SEMIA 419 organism-specific Integrated Microbial Genomes
2933586486: Rhizobium leguminosarum SEMIA 4039 organism-specific Integrated Microbial Genomes
8120901487: Rhizobium leguminosarum SM52 organism-specific Integrated Microbial Genomes
8111293740: Rhizobium leguminosarum SM51 organism-specific Integrated Microbial Genomes
2842363717: Rhizobium leguminosarum SEMIA 4016 organism-specific Integrated Microbial Genomes
2585427526: Rhizobium leguminosarum OV152 organism-specific Integrated Microbial Genomes
2585427528: Rhizobium leguminosarum CF307 organism-specific Integrated Microbial Genomes
2582581299: Rhizobium leguminosarum OV483 organism-specific Integrated Microbial Genomes
2842243621: Rhizobium leguminosarum SEMIA 483 organism-specific Integrated Microbial Genomes
2724679232: Rhizobium leguminosarum Vaf12 organism-specific Integrated Microbial Genomes
2842156927: Rhizobium leguminosarum SEMIA 459 organism-specific Integrated Microbial Genomes
2841864319: Rhizobium leguminosarum SEMIA 4052 organism-specific Integrated Microbial Genomes
2842163707: Rhizobium leguminosarum SEMIA 460 organism-specific Integrated Microbial Genomes
2841851746: Rhizobium leguminosarum SEMIA 498 organism-specific Integrated Microbial Genomes
2842217011: Rhizobium leguminosarum SEMIA 475 organism-specific Integrated Microbial Genomes
2842257432: Rhizobium leguminosarum SEMIA 485 organism-specific Integrated Microbial Genomes
2838680041: Rhizobium leguminosarum SEMIA 415 organism-specific Integrated Microbial Genomes
2861129306: Rhizobium trifolii DSM 30141 organism-specific Integrated Microbial Genomes
2842180545: Rhizobium leguminosarum SEMIA 463 organism-specific Integrated Microbial Genomes
2861339494: Rhizobium leguminosarum DSM 106839 organism-specific Integrated Microbial Genomes
2842291075: Rhizobium leguminosarum SEMIA 491 organism-specific Integrated Microbial Genomes
2838707686: Rhizobium leguminosarum SEMIA 430 organism-specific Integrated Microbial Genomes
2842377471: Rhizobium leguminosarum SEMIA 4024 organism-specific Integrated Microbial Genomes
2838742623: Rhizobium leguminosarum SEMIA 449 organism-specific Integrated Microbial Genomes
2838729681: Rhizobium leguminosarum SEMIA 445 organism-specific Integrated Microbial Genomes
2842370503: Rhizobium leguminosarum SEMIA 4022 organism-specific Integrated Microbial Genomes
2738541328: Rhizobium leguminosarum CGMCC 1.2553 organism-specific Integrated Microbial Genomes
Rhizobium leguminosarum (T) | SeqCode Registry taxonomy/phylogenetic SeqCode Registry
Rhizobium leguminosarum type strain (SI-ID 4783) meta-databases StrainInfo, Leibniz Institute DSMZ
Rhizobium leguminosarum type strain (SI-ID 4782) meta-databases StrainInfo, Leibniz Institute DSMZ
Notes:
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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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