Link to NCBI Front Page Taxonomy Logo

Try the new NCBI Taxonomy Browser for enhanced search and links to other NCBI data!
This legacy page is planned to be replaced in October 2026. Read more

Entrez PubMed Nucleotide Protein Genome Structure PMC Taxonomy BioCollections
   
   Entrez records   
Database name Direct links Subtree links Links from type
BioProject 87 91 -
BioSample 609 612 -
GEO DataSets 17 17 -
Gene 18,078 18,078 -
Identical Protein Groups 287,613 287,613 -
Nucleotide 33,515 34,038 490
PubChem BioAssay 7 7 -
PMC 657 657 -
Protein 603,828 603,829 -
SRA 110 112 -
Structure 1 1 -
Taxonomy 4 4 -

Shewanella algae

Taxonomy ID: 38313 (for references in articles please use ncbitaxon:38313)
current name
Shewanella algae corrig.  Simidu et al. 1990 emend. Thorell et al. 2019
homotypic synonym:
Shewanella algae corrig.  Simidu et al. 1990 emend. Nozue et al. 1992
type strain of Shewanella algae: ATCC : 51192 , CCUG : 39064 , CIP : 106454 , IAM : 14159 , JCM : 21037 , NBRC : 103173 , personal : OK-1 , DSM : 9167 , CECT : 5071
Shewanella alga
includes:
Shewanella sp. CNZ-1
NCBI BLAST name: g-proteobacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
heterotypic synonym Shewanella haliotis  Kim et al. 2007
type strain of Shewanella haliotis: JCM : 14758 , KCTC : 12896 , personal : DW01
heterotypic synonym Shewanella upenei  Kim et al. 2012
type strain of Shewanella upenei: CCUG : 58400 , KCTC : 22806 , personal : 20-23R
Lineage(full)
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella

Comments and References:

Kim D et al. (2007)
Kim, D., Baik, K.S., Kim, M.S., Jung, B.-M., Shin, T.-S., Chung, G.-H., Rhee, M.S., and Seong, C.N. "Shewanella haliotis sp. nov., isolated from the gut microflora of abalone, Haliotis discus hannai." Int. J. Syst. Evol. Microbiol. (2007) 57:2926-29231.
Nozue H et al. (1992)
Nozue, H., Hayashi, T., Hashimoto, Y., Ezaki, T., Hamasaki, K., Ohwada, K., Terawaki, Y. "Isolation and characterization of Shewanella alga from human clinical specimens and emendation of the description of S. alga Simidu et al., 1990, 335." Int. J. Syst. Bacteriol. (1992) 42:628-634.
Trüper HG & De'clari L (1997) (reference relating to orthographic revision)
Trüper, H.G., and De'clari, L. "Taxonomic note: Necessary correction of specific epithets formed as substantives (nouns) 'in apposition'." Int. J. Syst. Bacteriol. (1997) 47(3):908-909. [No PubMed record available.]
Simidu U et al. (1990)
Simidu, U., Kita-Tsukamoto, K., Yasumoto, T., and Yotsu, M. "Taxonomy of four marine bacterial strains that produce tetrodotoxin." Int. J. Syst. Bacteriol. (1990) 40:331-336.
Szeinbaum N et al. (2018)
Szeinbaum, N., Kellum, C.E., Glass, J.B., Janda, J.M., and DiChristina, T.J. "Whole-genome sequencing reveals that Shewanella haliotis Kim et al. 2007 can be considered a later heterotypic synonym of Shewanella algae Simidu et al. 1990." Int. J. Syst. Evol. Microbiol. (2018) 68:1356-1360.
Thorell K et al. (2019)
Thorell, K., Meier-Kolthoff, J.P., Sjöling, Å, and Martín-Rodríguez, A.J. "Whole-genome sequencing redefines Shewanella taxonomy." Front. Microbiol. (2019) 10:1861.
Fang Y et al. (2017)
Fang, Y., Wang, Y., Liu, Z., Lu, B., Dai, H., Kan, B., and Wang, D. "Shewanella carassii sp. nov., isolated from surface swabs of crucian carp and faeces of a diarrhoea patient." Int. J. Syst. Evol. Microbiol. (2017) 67:5284-5289.
Kim KK et al. (2011)
Kim, K.-K., Kim, Y.-O., Park, S., Kang, S.-J., Nam, B.-H., Kim, D.N., Oh, T.-K., and Yoon, J.-H. "Shewanella upenei sp. nov., a lipolytic bacterium isolated from bensasi goatfish Upeneus bensasi." J. Microbiol. (2011) 49:381-386.
VALIDATION LIST No. 146 (2012) (Shewanella upenei)
Validation List No. 146: "List of new names and new combinations previously effectively, but not validly, published." Int. J. Syst. Evol. Microbiol. (2012) 62:1443-1445.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Shewanella algae type strain (BD-ID 14062) meta-databases BacDive
Shewanella algae type strain (BD-ID 134289) meta-databases BacDive
Shewanella algae type strain (BD-ID 155616) meta-databases BacDive
Shewanella algae KC-Na-R1 organism-specific BioCyc
Shewanella algae MARS 14 organism-specific BioCyc
Shewanella algae MARS 14 organism-specific BioCyc
Shewanella algae KC-Na-R1 organism-specific BioCyc
Shewanella algae MARS 14 organism-specific BioCyc
Shewanella algae KC-Na-R1 organism-specific BioCyc
Shewanella algae corrig. Simidu et al., 1990 taxonomy/phylogenetic Encyclopedia of life
GOLD: 71 Organisms organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Shewanella algae culture/stock collections Global Catalogue of Microorganisms
8112380676: Shewanella algae CCUG-58400 organism-specific Integrated Microbial Genomes
8080977951: Shewanella algae A291 organism-specific Integrated Microbial Genomes
8080986841: Shewanella algae 150735 organism-specific Integrated Microbial Genomes
2546826727: Shewanella algae BRY organism-specific Integrated Microbial Genomes
8080319752: Shewanella algae CECT-5071 organism-specific Integrated Microbial Genomes
8080982459: Shewanella algae A59 organism-specific Integrated Microbial Genomes
2911952840: Shewanella algae RQs-106 organism-specific Integrated Microbial Genomes
2856000362: Shewanella algae 20-23R organism-specific Integrated Microbial Genomes
2849008052: Shewanella algae KC-Na-R1 organism-specific Integrated Microbial Genomes
2859010247: Shewanella algae Sh392 organism-specific Integrated Microbial Genomes
2843899918: Shewanella haliotis CCU101 organism-specific Integrated Microbial Genomes
2857312682: Shewanella algae CSB04KR organism-specific Integrated Microbial Genomes
2568526028: Shewanella algae C6G3 organism-specific Integrated Microbial Genomes
2645727990: Shewanella algae MARS 14 organism-specific Integrated Microbial Genomes
2510461018: Shewanella algae ACDC organism-specific Integrated Microbial Genomes
Shewanella algae Simidu, Kita-Tsukamoto, Yasumoto & Yotsu, 1990 taxonomy/phylogenetic Ocean Biogeographic Information System
Shewanella algae type strain (SI-ID 411870) meta-databases StrainInfo, Leibniz Institute DSMZ
Shewanella algae type strain (SI-ID 323267) meta-databases StrainInfo, Leibniz Institute DSMZ
Shewanella algae type strain (SI-ID 11992) meta-databases StrainInfo, Leibniz Institute DSMZ
Shewanella algae Simidu, Kita-Tsukamoto, Yasumoto & Yotsu, 1990 taxonomy/phylogenetic World Register of Marine Species
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


Comments and questions to info@ncbi.nlm.nih.gov

[Help] [Search] [NLM NIH] [Disclaimer]