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Taxonomy browser (Pseudomonas protegens)

Pseudomonas protegens

Taxonomy ID: 380021 (for references in articles please use NCBI:txid380021)
current name
Pseudomonas protegens Ramette et al. 2012 in [Validation List No. 146 (2012)]
type strain of Pseudomonas protegens: CFBP:6595, DSM:19095, personal::CHA0
includes:
Pseudomonas sp. CHA0
Pseudomonas sp. H1F5C
Pseudomonas sp. MWU12-2233
Pseudomonas sp. MWU341
Pseudomonas sp. PF
Pseudomonas sp. PGNL1
Pseudomonas sp. PGNR1
Pseudomonas sp. PGNR2
Pseudomonas sp. PGNR3
Pseudomonas sp. PGNR4
Pseudomonas sp. PINR3
Pseudomonas sp. Pf1
NCBI BLAST name: g-proteobacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas chlororaphis group
   Entrez records   
Database name Subtree links Direct links Links from type
Nucleotide 11,609 11,263 82
Protein 491,173 465,499 -
Structure 90 2 -
Genome 2 1 -
Popset 111 111 -
GEO Datasets 148 84 -
PubMed Central 671 671 -
Gene 25,479 1 -
SRA Experiments 441 235 -
Protein Clusters 3,064 3,064 -
Identical Protein Groups 180,536 178,865 -
BioProject 162 105 -
BioSample 524 325 130
Assembly 104 100 3
Taxonomy 4 1 -

Comments and References:
Validation List No. 146 (2012)
Validation List No. 146: "List of new names and new combinations previously effectively, but not validly, published." Int. J. Syst. Evol. Microbiol. (2012) 62(7):1443-1445.
Ramette A et al. (2011)
Ramette, A., Frapolli, M., Saux, M.F., Gruffaz, C., Meyer, J.M., Defago, G., Sutra, L., and Moenne-Loccoz, Y. "Pseudomonas protegens sp. nov., widespread plant-protecting bacteria producing the biocontrol compounds 2,4-diacetylphloroglucinol and pyoluteorin." Syst. Appl. Microbiol. (2011) 34:180-188.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Pseudomonas protegens meta-databases BacDive
4 records from this provider organism-specific Genomes On Line Database
33 records from this provider organism-specific Integrated Microbial Genomes
Pseudomonas protegens taxonomy/phylogenetic Lifemap
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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