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Taxonomy browser (Gossypium hirsutum)

Gossypium hirsutum

Taxonomy ID: 3635 (for references in articles please use NCBI:txid3635)
Scientific name: Gossypium hirsutum
current: Gossypium hirsutum
Genbank common name: cotton
Inherited blast name: eudicots
Rank: species
Genetic code: Translation table 1 (Standard)
Mitochondrial genetic code: Translation table 1 (Standard)
Plastid genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
synonym: Gossypium hirsutum subsp. mexicanum
 
current: Gossypium hirsutum subsp. mexicanum
synonym: Gossypium lanceolatum
 
current: Gossypium lanceolatum
synonym: Gossypium purpurascens
 
current: Gossypium purpurascens
common name: American cotton
common name: American upland cotton
Lineage( full )
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
   Entrez records   
Database name Subtree links Direct links
Nucleotide 248,330 248,195
Nucleotide EST 337,811 337,811
Nucleotide GSS 242,015 242,015
Protein 96,464 96,245
Structure 2 2
Genome 1 1
Popset 108 107
GEO Datasets 1,508 1,508
UniGene 21,406 21,406
PubMed Central 3,200 3,197
Gene 78,221 78,221
SRA Experiments 4,188 4,084
GEO Profiles 24,132 24,132
Protein Clusters 79 79
Identical Protein Groups 78,438 78,392
Bio Project 241 238
Bio Sample 5,663 5,559
Assembly 2 2
Clone DB 120,569 120,569
Probe 11,874 11,874
PubChem BioAssay 80 80

Comments and References:

Nota BeneGRIN (Mar 14, 2008)
Name verified on 14 March 2008 in: USDA, ARS, National Genetic Resources Program. Germplasm Resources Information Network - (GRIN) [Online Database]. National Germplasm Resources Laboratory, Beltsville, Maryland.

Nota BeneFNA - Gossypium
Fryxell PA and Hill SR. 2015. Gossypium Linnaeus, Sp. Pl. 2: 693. 1753; Gen. Pl. ed. 5, 309. 1754. In Flora of North America Editorial Committee (Eds.) Flora of North America North of Mexico, Volume 6: Magnoliophyta: Cucurbitaceae to Droseraceae. Online version.


Genome Information

Go to NCBI genomic BLAST page for Gossypium hirsutum

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Gossypium hirsutum taxonomy taxonomy/phylogenetic Arctos Specimen Database
Gossypium hirsutum L. taxonomy/phylogenetic Encyclopedia of life
GOLD: Go0017593 organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Gossypium hirsutum L. taxonomy/phylogenetic Integrated Taxonomic Information System
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Gossypium hirsutum taxonomy/phylogenetic PLANTS Database (USDA/NRCS)
Gossypium hirsutum taxonomy/phylogenetic The International Plant Names Index
Gossypium hirsutum taxonomy/phylogenetic TreeBase
Gossypium hirsutum L. taxonomy/phylogenetic USDA-ARS GRIN Taxonomy
search W3TROPICOS taxonomy/phylogenetic Vascular Tropicos
WebScipio: Gossypium hirsutum organism-specific WebScipio - eukaryotic gene identification
diArk: Gossypium hirsutum organism-specific diArk - a resource for eukaryotic genome research
Gossypium hirsutum taxonomy/phylogenetic electronic Plant Information Centre
Wikipedia taxonomy/phylogenetic iPhylo
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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