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Taxonomy browser (BOP clade)

BOP clade

Taxonomy ID: 359160 (for references in articles please use NCBI:txid359160)
current name
BOP clade
equivalent:
BEP clade
NCBI BLAST name: monocots
Rank: clade
Genetic code: Translation table 1 (Standard)
Mitochondrial genetic code: Translation table 1 (Standard)
Plastid genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliopsida; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae
   Entrez records   
Database name Subtree links Direct links
Nucleotide 16,999,243 -
Protein 2,061,167 -
Structure 691 -
Genome 68 -
Popset 4,812 523
Conserved Domains 20 3
GEO Datasets 39,611 -
PubMed Central 88,936 73
Gene 830,693 -
HomoloGene 9,787 -
SRA Experiments 523,382 -
GEO Profiles 739,459 -
Protein Clusters 19,079 -
Identical Protein Groups 1,259,358 -
BioProject 16,992 -
BioSample 426,391 -
Assembly 589 -
PubChem BioAssay 2,094 -
Taxonomy 5,735 1

Comments and References:

Soreng RJ et al. (2017), doi:10.1111/jse.12262
Soreng RJ, Peterson PM, Romaschenko K, Davidse G, Teisher JK, Clark LG, Barberá P, Gillespie LJ, Zuloaga FO. 2017. A worldwide phylogenetic classification of the Poaceae (Gramineae) II: An update and a comparison of two 2015 classifications. Journal of Systematics and Evolution 55(4):259-290.
Soreng RJ et al. 2015a, doi:10.1111/jse.12150
Soreng RJ, Peterson PM, Romaschenko K, Davidse G, Zuloaga FO, Judziewicz EJ, Filgueiras TS, Davis JI & Morrone O. 2015. A worldwide phylogenetic classification of the Poaceae (Gramineae). Journal of Systematics and Evolution 53(2): 117-137. Article first published online: 23 Mar 2015. DOI: http://dx.doi.org/10.1111/jse.12150
Grass Phylogeny Working Group II, doi:10.1111/j.1469-8137.2011.03972.x
Grass Phylogeny Working Group II. 2012. New grass phylogeny resolves deep evolutionary relationships and discovers C4 origins. New Phytologist (2012) 193: 304-312. doi: http://dx.doi.org/10.1111/j.1469-8137.2011.03972.x
Grass Phylogeny Working Group
Grass Phylogeny Working Group. 2001. Phylogeny and subfamilial classification of the grasses (Poaceae). Annals of the Missouri Botanical Garden 88: 373-457.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
BOP clade taxonomy/phylogenetic Lifemap
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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