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Taxonomy browser (Yersinia pestis Angola)

Yersinia pestis Angola

Taxonomy ID: 349746 (for references in articles please use NCBI:txid349746)
Scientific name: Yersinia pestis Angola
Inherited blast name: enterobacteria
Rank: no rank
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
equivalent name: Yersinia pestis str. Angola
equivalent name: Yersinia pestis strain Angola
Lineage( abbreviated )
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Yersiniaceae; Yersinia
   Entrez records   
Database name Direct links
Nucleotide 87
Protein 12,932
Genome 1
PubMed Central 6
Gene 4,473
SRA Experiments 3
Identical Protein Groups 5,662
Bio Project 3
Bio Sample 3
Bio Systems 268
Assembly 2
Taxonomy 1

Comments and References:

genome sequence
Determination of the DNA genome sequence of this strain has been or is being determined either in whole or in part.

Reference to PubMed documentEppinger M et al. (2010)
Eppinger, M., Worsham, P.L., Nikolich, M.P., Riley, D.R., Sebastian, Y., Mou, S., Achtman, M., Lindler, L.E., and Ravel, J. "Genome sequence of the deep-rooted Yersinia pestis strain Angola reveals new insights into the evolution and pangenome of the plague bacterium." J. Bacteriol. (2010) 192:1685-1699.


Genome Information

See the TRACE Assembly
   Trace records (raw single-pass reads of DNA sequence)   
Sequencing Center Name
Record counts per type
PRIMERWALK TRANSPOSON WGS ALL
JCVI - J. Craig Venter Institute
1,366 4,276 72,077 77,719
Totals per type
1,366 4,276 72,077 77,719

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Yersinia pestisAngola organism-specific BioCyc
GOLD: Go0002219 organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Related Immune Epitope Information gene/protein/disease-specific Immune Epitope Database and Analysis Resource
2 records from this provider organism-specific Integrated Microbial Genomes
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Notes:
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Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.


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