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Taxonomy browser (Lotus japonicus)

Lotus japonicus

Taxonomy ID: 34305 (for references in articles please use NCBI:txid34305)
Scientific name: Lotus japonicus (Regel) K.Larsen
homotypic synonym: Lotus corniculatus var. japonicus Regel
Inherited blast name: eudicots
Rank: species
Genetic code: Translation table 1 (Standard)
Mitochondrial genetic code: Translation table 1 (Standard)
Plastid genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; robinioid clade; Loteae; Lotus
   Entrez records   
Database name Direct links
Nucleotide 15,220
Nucleotide EST 242,432
Nucleotide GSS 46,569
Protein 9,579
Structure 1
Genome 1
Popset 27
GEO Datasets 67
UniGene 21,003
PubMed Central 2,297
Gene 356
SRA Experiments 1,003
Protein Clusters 76
Identical Protein Groups 8,799
Bio Project 39
Bio Sample 1,398
Bio Systems 248
Assembly 2
Clone DB 27,497
Probe 1,700
Taxonomy 1

Comments and References:

Lotus japonicus
Although Lotus japonicus can be difficult to distinguish from L. corniculatus morphologically, it is diploid, in contrast to the tetraploid state of L. corniculatus; thus it is best to distinguish it as a distinct species from the heterogeneous L. corniculatus. (A. Liston, pers. comm., Jan. 31, 2006).

Nota BeneTROPICOS (Oct 14, 2014)
Name accessed on 14 October 2014 in: Tropicos.org. Missouri Botanical Garden, 2008 - 4344 Shaw Boulevard, Saint Louis, Missouri 63110, U.S.A. on line at: http://www.tropicos.org/


Genome Information

Go to NCBI genomic BLAST page for Lotus japonicus
Genome view: 7 chromosomes
Names 1 2 3 4 5 6 Pltd

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Lotus corniculatus var. japonicus Regel taxonomy/phylogenetic Encyclopedia of life
2 records from this provider organism-specific Genomes On Line Database
EST Index clones/clone libraries Kazusa DNA Research Institute
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Lotus japonicus taxonomy/phylogenetic The International Plant Names Index
Lotus japonicus taxonomy/phylogenetic TreeBase
2 records from this provider taxonomy/phylogenetic USDA-ARS GRIN Taxonomy
search W3TROPICOS taxonomy/phylogenetic Vascular Tropicos
WebScipio: Lotus japonicus organism-specific WebScipio - eukaryotic gene identification
diArk: Lotus japonicus organism-specific diArk - a resource for eukaryotic genome research
Lotus japonicus taxonomy/phylogenetic electronic Plant Information Centre
Wikipedia taxonomy/phylogenetic iPhylo
Notes:
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A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.


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