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Entrez PubMed Nucleotide Protein Genome Structure PMC Taxonomy BioCollections
   
   Entrez records   
Database name Direct links Subtree links Links from type
BioProject 51 52 -
BioSample 252 253 -
Gene 3,266 6,436 -
Identical Protein Groups 53,569 54,083 -
Nucleotide 18,989 19,053 134
PubChem BioAssay 1 1 -
Protein 132,512 136,115 -
SRA 171 171 -
Structure - 3 -
Taxonomy 2 2 -

Clavibacter michiganensis subsp. michiganensis

Taxonomy ID: 33013 (for references in articles please use ncbitaxon:33013)
current name
Clavibacter michiganensis subsp. michiganensis corrig.  (Smith 1910) Davis et al. 1984
type strain of Corynebacterium michiganense: CFBP : 2352 , CIP : 104846 , DSM : 46364 , ICMP : 2550 , JCM : 9665 , BCCM/LMG : 7333 , NCPPB : 2979 , VKM:Ac : 1403 , CFBP : 4999 , CCUG : 23363
equivalent:
Clavibacter michiganensis michiganensis
homotypic synonym:
Corynebacterium michiganense subsp. michiganense
Clavibacter michiganense michiganense
NCBI BLAST name: high G+C Gram-positive bacteria
Rank: subspecies
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage(full)
cellular organisms; Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales; Microbacteriaceae; Clavibacter; Clavibacter michiganensis

Notes:

Comments and References:

Carlson RR & Vidaver AK (1982)
Carlson, R.R., and Vidaver, A.K. "Taxonomy of Corynebacterium plant pathogens, including a new pathogen of wheat, based on polyacrylamide gel electrophoresis of cellular proteins." Int. J. Syst. Bacteriol. (1982) 32(3):315-326. [No PubMed record available.]
Davis MY et al. (1984)
Davis, M.J., Gillaspsie Jr., A.G., Vidaver, A.K., and Harris, R.W. "Clavibacter: a new genus containing some phytopathogenic coryneform bacteria, including Clavibacter xyli subsp. xyli sp. nov., subsp. nov. and Clavibacter xyli subsp. cynodontis subsp. nov., pathogens that cause ratoon stunting disease of sugarcane and Bermudagrass stunting disease." Int. J. Syst. Bacteriol. (1984) 34:107-117. [No PubMed record available.]
Li X & Yuan X (2017)
Li, X., and Yuan, X. "Genome sequences for multiple Clavibacter strains from different subspecies." Genome Announc. (2017) 5:e00721-17.
Young JM et al. (1996)
Young, J.M., Saddler, G.S., Takikawa, Y., De Boer, S.H., Vauterin, L., Gardan, L., Gvozdyak, R.I., and Stead, D.E. "Names of plant pathogenic bacteria 1864-1995." Rev. Plant Pathol. (1996) 75:721-763. [N.B.: reference with type strain information]
Zgurskaya HI et al. (1993) (reference relating to orthographic revision)
Zgurskaya, H.I., Evtushenko, L.I., Akimov, V.N., and Kalakoutskii. L.V. "Rathayibacter gen. nov., including the species Rathayibacter rathayi comb. nov., Rathayibacter tritici comb. nov., Rathayibacter iranicus comb. nov., and six strains from annual grasses." Int. J. Syst. Bacteriol. (1993) 43:143-149. [No PubMed record available.]

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Clavibacter michiganensis type strain (BD-ID 7289) meta-databases BacDive
Clavibacter michiganensis subsp. michiganensis corrig. (Smith 1910) Davis et al., 1984 taxonomy/phylogenetic Encyclopedia of life
GOLD: 17 Organisms organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Clavibacter michiganensis subsp. michiganensis culture/stock collections Global Catalogue of Microorganisms
2982811083: Clavibacter michiganensis michiganensis A5747* organism-specific Integrated Microbial Genomes
2917713189: Clavibacter michiganensis michiganensis UF1 organism-specific Integrated Microbial Genomes
2982829303: Clavibacter michiganensis michiganensis A4758 organism-specific Integrated Microbial Genomes
2982005520: Clavibacter michiganensis PvP034 organism-specific Integrated Microbial Genomes
2852060097: Clavibacter michiganensis michiganensis CASJ008 organism-specific Integrated Microbial Genomes
2854244720: Clavibacter michiganensis michiganensis CAYO001 organism-specific Integrated Microbial Genomes
2848779426: Clavibacter michiganensis michiganensis CASJ003 organism-specific Integrated Microbial Genomes
2848505899: Clavibacter michiganensis michiganensis CASJ007 organism-specific Integrated Microbial Genomes
2854251581: Clavibacter michiganensis michiganensis CA00002 organism-specific Integrated Microbial Genomes
2852427810: Clavibacter michiganensis michiganensis CASJ006 organism-specific Integrated Microbial Genomes
2846569705: Clavibacter michiganensis michiganensis CASJ005 organism-specific Integrated Microbial Genomes
2846584114: Clavibacter michiganensis michiganensis CASJ001 organism-specific Integrated Microbial Genomes
2848373800: Clavibacter michiganensis michiganensis CASJ004 organism-specific Integrated Microbial Genomes
2854238995: Clavibacter michiganensis michiganensis CA00001 organism-specific Integrated Microbial Genomes
2806310641: Clavibacter michiganensis michiganensis CASJ002 organism-specific Integrated Microbial Genomes
Clavibacter michiganensis subsp. michiganensis | SeqCode Registry taxonomy/phylogenetic SeqCode Registry
Notes:
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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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