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Entrez PubMed Nucleotide Protein Genome Structure PMC Taxonomy BioCollections
   
   Entrez records   
Database name Direct links Subtree links Links from type
BioProject 140 513 -
BioSample 1,751 3,336 -
Conserved Domains 1 1 -
GEO DataSets 252 557 -
Gene 16,019 32,855 -
Identical Protein Groups 698,470 940,096 -
Nucleotide 79,443 327,898 6,634
PubChem BioAssay 28 37 -
PMC 15,297 15,297 -
Protein 1,155,793 2,675,378 -
SRA 1,443 2,649 -
Structure 45 60 -
Taxonomy 175 175 -

Pseudomonas syringae

Taxonomy ID: 317 (for references in articles please use ncbitaxon:317)
current name
Pseudomonas syringae  van Hall 1902
type strain of Pseudomonas syringae: ATCC : 19310 , CCUG : 14279 , CFBP : 1392 , CIP : 106698 , ICMP : 3023 , BCCM/LMG : 1247 , : , NCPPB : 281 , NRRL : B-1631 , DSM : 10604 , KCTC : 12500
includes:
Pseudomonas sp. GR12-2
homotypic synonym:
Pseudomonas syringae subsp. syringae  van Hall 1902
NCBI BLAST name: g-proteobacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage(full)
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas syringae group; Pseudomonas syringae group genomosp. 1

Comments and References:

Gardan L et al. (1991)
Gardan, L., Cottin, S., Bollet, C., and Hunault, G. "Phenotypic heterogeneity of Pseudomonas syringae van Hall." Res. Microbiol. (1991) 142:995-1003.
Gardan L et al. (1999)
Gardan, L., Shafik, H., Belouin, S., Broch, R., Grimont, F., and Grimont, P.A.D. "DNA relatedness among the pathovars of Pseudomonas syringae and description of Pseudomonas tremae sp. nov. and Pseudomonas cannabina sp. nov. (ex Sutic and Dowson 1959)." Int. J. Syst. Bacteriol. (1999) 49:469-478. [N.B.: Gardan et al. claim strains CFBP 1660 (pathotype of P. syringae pv. primulae) and CFBP 2348 (pathotype of P. syringae pv. ribicola) are misidentified and should be transferred to Pseudomonas viridiflava.]
Sawada H et al. (1999)
Sawada, H., Suzuki, F., Matsuda, I., and Saitou, N. "Phylogenetic analysis of Pseudomonas syringae pathovars suggests the horizontal gene transfer of argK and the evolutionary stability of hrp gene cluster." J. Mol. Evol. (1999) 49:627-644.
Skerman VBD et al. (1980)
Skerman, V.B.D., McGowan, V., and Sneath, P.H.A. (editors). "Approved lists of bacterial names." Int. J. Syst. Bacteriol. (1980) 30(1):225-420. [No PubMed record available.]
Young JM et al. (1996)
Young, J.M., Saddler, G.S., Takikawa, Y., De Boer, S.H., Vauterin, L., Gardan, L., Gvozdyak, R.I., and Stead, D.E. "Names of plant pathogenic bacteria 1864-1995." Rev. Plant Pathol. (1996) 75:721-763. [N.B.: reference with type strain information]

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Pseudomonas syringae type strain (BD-ID 13024) meta-databases BacDive
Pseudomonas syringae type strain (BD-ID 24420) meta-databases BacDive
Pseudomonas syringae isolate inb918 chromosome organism-specific BioCyc
Pseudomonas syringae isolate inb918 chromosome organism-specific BioCyc
Pseudomonas syringae isolate inb918 chromosome organism-specific BioCyc
dryaddb supplemental materials Dryad Digital Repository
GOLD: 110 Organisms organism-specific Genomes On Line Database
Pseudomonas syringae culture/stock collections Global Catalogue of Microorganisms
2713897326: Pseudomonas syringae ZUM3984 reassembled organism-specific Integrated Microbial Genomes
2713897325: Pseudomonas syringae ZUM3584 reassembled organism-specific Integrated Microbial Genomes
2713897311: Pseudomonas syringae 03-19A reassembled organism-specific Integrated Microbial Genomes
2738541351: Pseudomonas syringae 711 organism-specific Integrated Microbial Genomes
2713897318: Pseudomonas syringae 13-C2 reasembled organism-specific Integrated Microbial Genomes
2713897322: Pseudomonas syringae 200-1 reassembled organism-specific Integrated Microbial Genomes
2713897314: Pseudomonas syringae 13-140A reassembled organism-specific Integrated Microbial Genomes
2713897319: Pseudomonas syringae 14-32 reassembled organism-specific Integrated Microbial Genomes
2860910490: Pseudomonas syringae inb918 organism-specific Integrated Microbial Genomes
2506783056: Pseudomonas syringae PmpFTRS_U7 organism-specific Integrated Microbial Genomes
2505313048: Pseudomonas syringae PmaYM7930 organism-specific Integrated Microbial Genomes
2505313051: Pseudomonas syringae PphY5_2 organism-specific Integrated Microbial Genomes
2505313050: Pseudomonas syringae PmeN6801 organism-specific Integrated Microbial Genomes
2693429915: Pseudomonas syringae pv. aptata BS3827 organism-specific Integrated Microbial Genomes
2506783058: Pseudomonas syringae PsyB48 organism-specific Integrated Microbial Genomes
2505313053: Pseudomonas syringae PseHC_1 organism-specific Integrated Microbial Genomes
2505313044: Pseudomonas syringae PlaYM7902 organism-specific Integrated Microbial Genomes
2505313047: Pseudomonas syringae PmaH7608 organism-specific Integrated Microbial Genomes
2508501072: Pseudomonas syringae Pph1448A organism-specific Integrated Microbial Genomes
2986620692: Pseudomonas syringae CFBP3840 organism-specific Integrated Microbial Genomes
8120707728: Pseudomonas syringae Susan2139 organism-specific Integrated Microbial Genomes
8072203289: Pseudomonas syringae PDD-32b-74 organism-specific Integrated Microbial Genomes
2966791590: Pseudomonas syringae MUP17 organism-specific Integrated Microbial Genomes
2974440541: Pseudomonas syringae MUP20 organism-specific Integrated Microbial Genomes
8079054357: Pseudomonas syringae RAYR-BL organism-specific Integrated Microbial Genomes
2972046094: Pseudomonas syringae CFBP 2116 organism-specific Integrated Microbial Genomes
2962447044: Pseudomonas syringae B13-200 organism-specific Integrated Microbial Genomes
2974445944: Pseudomonas syringae MUP32 organism-specific Integrated Microbial Genomes
2713897320: Pseudomonas syringae 14-410 reassembled organism-specific Integrated Microbial Genomes
2935396963: Pseudomonas syringae PvP003 organism-specific Integrated Microbial Genomes
3007712643: Pseudomonas syringae GR12-2 organism-specific Integrated Microbial Genomes
2713897316: Pseudomonas syringae 13-509A reassembled organism-specific Integrated Microbial Genomes
2713897315: Pseudomonas syringae 13-429 reassembled organism-specific Integrated Microbial Genomes
2713897321: Pseudomonas syringae 14-Gil reassembled organism-specific Integrated Microbial Genomes
2713897323: Pseudomonas syringae BS2121 reassembled organism-specific Integrated Microbial Genomes
2713897313: Pseudomonas syringae 13-139B reassembled organism-specific Integrated Microbial Genomes
2877826310: Pseudomonas syringae Ps25 organism-specific Integrated Microbial Genomes
2687453695: Pseudomonas syringae pv. aptata BS0292 organism-specific Integrated Microbial Genomes
2687453747: Pseudomonas syringae pv. fabae BS2731 organism-specific Integrated Microbial Genomes
2505313046: Pseudomonas syringae PmaES4326 organism-specific Integrated Microbial Genomes
2505313052: Pseudomonas syringae PphNPS3121 organism-specific Integrated Microbial Genomes
2505313049: Pseudomonas syringae PmaKN91 organism-specific Integrated Microbial Genomes
2554235025: Pseudomonas syringae organism-specific Integrated Microbial Genomes
2687453696: Pseudomonas syringae pv. lachrymans BS2122 organism-specific Integrated Microbial Genomes
2505313040: Pseudomonas syringae PgyBR1 organism-specific Integrated Microbial Genomes
2648501644: Pseudomonas syringae Riq4 organism-specific Integrated Microbial Genomes
2505313045: Pseudomonas syringae Pla107 organism-specific Integrated Microbial Genomes
2505313042: Pseudomonas syringae PgyLN10 organism-specific Integrated Microbial Genomes
2681812921: Pseudomonas syringae pv. fabae BS2730 organism-specific Integrated Microbial Genomes
2506783057: Pseudomonas syringae Psv4352 organism-specific Integrated Microbial Genomes
2505313027: Pseudomonas syringae Pci0788_9 organism-specific Integrated Microbial Genomes
2505313041: Pseudomonas syringae PgyUnB647 organism-specific Integrated Microbial Genomes
2687453698: Pseudomonas syringae 31R1 organism-specific Integrated Microbial Genomes
2505313054: Pseudomonas syringae Pta6606 organism-specific Integrated Microbial Genomes
2681812922: Pseudomonas syringae pv. cannabina BS0967 organism-specific Integrated Microbial Genomes
2506783055: Pseudomonas syringae PacA10853 organism-specific Integrated Microbial Genomes
2505313058: Pseudomonas syringae PphHB10Y organism-specific Integrated Microbial Genomes
2617271065: Pseudomonas syringae CEB003 organism-specific Integrated Microbial Genomes
2505313043: Pseudomonas syringae PgyKN44 organism-specific Integrated Microbial Genomes
2687453722: Pseudomonas syringae pv. aptata BS3829 organism-specific Integrated Microbial Genomes
2693429914: Pseudomonas syringae pv. aptata BS3825 organism-specific Integrated Microbial Genomes
2507262033: Pseudomonas syringae TLP2 organism-specific Integrated Microbial Genomes
2687453748: Pseudomonas syringae pv. fabae BS2732 organism-specific Integrated Microbial Genomes
2505313056: Pseudomonas syringae Pla3988 organism-specific Integrated Microbial Genomes
2505313065: Pseudomonas syringae PmaM6 organism-specific Integrated Microbial Genomes
2681812920: Pseudomonas syringae pv. apii BS0426 organism-specific Integrated Microbial Genomes
2505313057: Pseudomonas syringae Pph1302A organism-specific Integrated Microbial Genomes
2619619245: Pseudomonas syringae UB0390 organism-specific Integrated Microbial Genomes
2627853650: Pseudomonas syringae B576 organism-specific Integrated Microbial Genomes
2505313055: Pseudomonas syringae PsyCit7 organism-specific Integrated Microbial Genomes
2617271066: Pseudomonas syringae GAW0119 organism-specific Integrated Microbial Genomes
2687453749: Pseudomonas syringae pv. apii BS2900 organism-specific Integrated Microbial Genomes
Pseudomonas syringae taxonomy/phylogenetic Lifemap
Pseudomonas syringae | SeqCode Registry taxonomy/phylogenetic SeqCode Registry
Pseudomonas syringae type strain (SI-ID 4542) meta-databases StrainInfo, Leibniz Institute DSMZ
Wikipedia taxonomy/phylogenetic iPhylo
Notes:
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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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