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Taxonomy browser (Rhodopseudomonas palustris HaA2)

Rhodopseudomonas palustris HaA2

Taxonomy ID: 316058 (for references in articles please use NCBI:txid316058)
Scientific name: Rhodopseudomonas palustris HaA2
Inherited blast name: a-proteobacteria
Rank: no rank
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
equivalent name: Rhodopseudomonas palustris str. HaA2
equivalent name: Rhodopseudomonas palustris strain HaA2
Lineage( full )
cellular organisms; Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas; Rhodopseudomonas palustris
   Entrez records   
Database name Direct links
Nucleotide 58
Protein 9,762
Structure 24
Genome 1
PubMed Central 8
Gene 4,773
SRA Experiments 2
Bio Project 2
Bio Sample 1
Bio Systems 235
Assembly 1
Taxonomy 1

Comments and References:

genome sequence
Determination of the DNA genome sequence of this strain has been or is being determined either in whole or in part.

Reference to PubMed documentOda Y et al. (2008)
Oda, Y., Larimer, F.W., Chain, P.S., Malfatti, S., Shin, M.V., Vergez, L.M., Hauser, L., Land, M.L., Braatsch, S., Beatty, J.T., Pelletier, D.A., Schaefer, A.L., and Harwood, C.S. "Multiple genome sequences reveal adaptations of a phototrophic bacterium to sediment microenvironments." Proc. Natl. Acad. Sci. USA (2008) 105:18543-18548.


Genome Information

   Trace records (raw single-pass reads of DNA sequence)   
Sequencing Center Name
Record counts per type
WGS ALL
JGI - Joint Genome Institute, U.S. Department of Energy
65,126 65,126
Totals per type
65,126 65,126

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Rhodopseudomonas palustris HaA2 organism-specific BioCyc
GOLD: Go0000391 organism-specific Genomes On Line Database
637000240: Rhodopseudomonas palustris HaA2 organism-specific Integrated Microbial Genomes
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.


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